RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 TSHZ1Q6ZSZ6 1077 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 MYO1HQ8N1T3 1032 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 PARP8Q8N3A8 854 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CHST13Q8NET6 341 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 PDCD6IPQ8WUM4 868 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CDCA5Q96FF9 252 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 COPG2Q9UBF2 871 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 GABBR2O75899 941 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 ATG7O95352 703 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 POMCP01189 267 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 UGT1A6P19224 532 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 SLC18A2Q05940 514 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 AGKQ53H12 422 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CLEC6AQ6EIG7 209 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 KCNMB4Q86W47 210 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CMTM5Q96DZ9 223 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 FSD1LQ9BXM9 530 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 SLC2A6Q9UGQ3 507 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 NFASCO94856 1347 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 PFKMP08237 780 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 SETSIPP0DME0 302 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 FGF3P11487 239 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 THOP1P52888 689 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 ACTR3P61158 418 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 NSUN2Q08J23 767 aaKnown RBP eCLIP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 KLF10Q13118 480 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PTPRCAPQ14761 206 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PDK2Q15119 407 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 CNPY1Q3B7I2 92 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 FBXO47Q5MNV8 452 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 OR6J1Q8NGC5 347 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 URGCPQ8TCY9 931 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 HIC2Q96JB3 615 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 UTP6Q9NYH9 597 aaKnown RBP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 ZNF212Q9UDV6 495 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 TNFSF13BQ9Y275 285 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 MTF2Q9Y483 593 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 KPNA7A9QM74 516 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 E7ENQ6 273 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 NRP1O14786 923 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 IL18RAPO95256 599 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PRKCGP05129 697 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 SERPINA6P08185 405 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 ALDH1A3P47895 512 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 CLDN10P78369 228 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 IL1RL1Q01638 556 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PCLAFQ15004 111 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 GRIK4Q16099 956 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 NCBP2-AS2Q69YL0 99 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 TRIM67Q6ZTA4 783 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 DDIASQ8IXT1 998 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 NXNL1Q96CM4 212 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 ILKAPQ9H0C8 392 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 LHX5Q9H2C1 402 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PLEKHA5Q9HAU0 1116 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PLAC1Q9HBJ0 212 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 PIGVQ9NUD9 493 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 XPR1Q9UBH6 696 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.25
TNFRSF8-203ENST00000417814 MYO7AQ13402 2215 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 TTC36A6NLP5 189 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 AURKAO14965 403 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 AKAP10O43572 662 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 SUPT7LO94864 414 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 PSMC3P17980 439 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 SPRP35270 261 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 ATP6V1E2Q96A05 226 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 FICDQ9BVA6 458 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 FZD8Q9H461 694 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 GBA2Q9HCG7 927 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 NME7Q9Y5B8 376 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 TRIP11Q15643 1979 aa13.46□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZBTB42B2RXF5 422 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ONECUT3O60422 494 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 CRCPO75575 148 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 KLHL2O95198 593 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 CKMT2P17540 419 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ITGAXP20702 1163 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 PLOD1Q02809 727 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 DBN1Q16643 649 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 LSM12Q3MHD2 195 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 LCLAT1Q6UWP7 414 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms