RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SYCE3A1L190 88 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CCDC162PA2VCL2 907 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 WIPF3A6NGB9 483 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 TMEM110-MUSTN1A8MSY1 372 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 H7BY64 318 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ZNF561-AS1K7EIQ3 104 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 GSTA4O15217 222 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 BIRC5O15392 142 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 RANBP6O60518 1105 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 GAS7O60861 476 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ATP6V1G1O75348 118 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 PRKD3O94806 890 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 MMEP08473 750 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 IFIT2P09913 472 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 SFPQP23246 707 aaKnown RBP eCLIP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CASRP41180 1078 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 MATKP42679 507 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 GRK6P43250 576 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 FNTAP49354 379 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 PAPOLAP51003 745 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ZNF132P52740 706 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 JAM2P57087 298 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 MCL1Q07820 350 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ITKQ08881 620 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 MPP3Q13368 585 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 IKZF1Q13422 519 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 TEAD2Q15562 447 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CRY1Q16526 586 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CCDC183Q5T5S1 534 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 SLC36A4Q6YBV0 504 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 DBX2Q6ZNG2 339 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 LCA5Q86VQ0 697 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 OSTM1Q86WC4 334 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CCDC65Q8IXS2 484 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CNTD1Q8N815 330 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 LEMD2Q8NC56 503 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 LNX1Q8TBB1 728 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CCHCR1Q8TD31 782 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 PLEKHO2Q8TD55 490 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 CUL5Q93034 780 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 SLC35B4Q969S0 331 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 MTMR8Q96EF0 704 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ZNF668Q96K58 619 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 P2RY13Q9BPV8 354 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 GORASP1Q9BQQ3 440 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 JPH2Q9BR39 696 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 GAREM1Q9H706 876 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 IFT122Q9HBG6 1241 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 EMC7Q9NPA0 242 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 OBP2AQ9NY56 170 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ORC3Q9UBD5 711 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 FBLN5Q9UBX5 448 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 FTSJ1Q9UET6 329 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 ADGRE2Q9UHX3 823 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 PCDHB2Q9Y5E7 798 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 X6R8D5 127 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 LRBAP50851 2863 aa5.79□□□□□ -1.48
ECHDC1-206ENST00000417628 UTP20O75691 2785 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 FAM25EA8MYX2 175 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 PRRG1O14668 218 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 GABRDO14764 452 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MSTNO14793 375 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TTI1O43156 1089 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CREB3O43889 395 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MOSPD3O75425 235 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TADA2AO75478 443 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 RNF8O76064 485 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 RECQL4O94761 1208 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 IGHDP01880 384 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ZGLP1P0C6A0 271 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CCDC166P0CW27 439 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 COL6A2P12110 1019 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MYL4P12829 197 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 GJA1P17302 382 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ITGB5P18084 799 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TRIM21P19474 475 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TMOD1P28289 359 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 OR1D2P34982 312 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MCM2P49736 904 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 GPC3P51654 580 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 EPHB1P54762 984 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 HDAC4P56524 1084 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CUL4BQ13620 913 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MYBPC3Q14896 1274 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ARHGAP44Q17R89 818 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 SKIDA1Q1XH10 827 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 INAVAQ3KP66 663 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ATP13A4Q4VNC1 1196 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CMPK2Q5EBM0 449 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 RALGPS1Q5JS13 557 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 FHL5Q5TD97 284 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CAPRIN2Q6IMN6 1127 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CC2D1AQ6P1N0 951 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 IL27RAQ6UWB1 636 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CRELD2Q6UXH1 353 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 PACS1Q6VY07 963 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CEP57Q86XR8 500 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 LMNTD2Q8IXW0 634 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ELMOD1Q8N336 334 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms