RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 KRT5P13647 590 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 RXRGP48443 463 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 NUCB2P80303 420 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
LINC00544-201ENST00000400540 GCNT1Q02742 428 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 CNTN1Q12860 1018 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
LINC00544-201ENST00000400540 SLC45A4Q5BKX6 768 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 AGBL4Q5VU57 503 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 BEND5Q7L4P6 421 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
LINC00544-201ENST00000400540 MFSD2AQ8NA29 543 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 SPAG5Q96R06 1193 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 MYOCQ99972 504 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 ERVMER34-1Q9H9K5 563 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 POPDC2Q9HBU9 364 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 CNTN6Q9UQ52 1028 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
LINC00544-201ENST00000400540 TRPM6Q9BX84 2022 aa12.27□□□□□ -0.44
LINC00544-201ENST00000400540 TRIM38O00635 465 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 PSMA7O14818 248 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.45
LINC00544-201ENST00000400540 BRINP1O60477 761 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 LETM1O95202 739 aaPredicted RBP12.27□□□□□ -0.45
LINC00544-201ENST00000400540 SMC2O95347 1197 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 CKMT2P17540 419 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 BMP6P22004 513 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 ACADSBP45954 432 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 TAS2R38P59533 333 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 YWHAZP63104 245 aaKnown RBP12.27□□□□□ -0.45
LINC00544-201ENST00000400540 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 RTP5Q14D33 572 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 ACCSLQ4AC99 568 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 FBXL22Q6P050 247 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 LRRC69Q6ZNQ3 347 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 Q6ZVU0 165 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 OXR1Q8N573 874 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 ATP6V0D2Q8N8Y2 350 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 KLK6Q92876 244 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 ALG14Q96F25 216 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 FCRL3Q96P31 734 aaPredicted RBP12.27□□□□□ -0.45
LINC00544-201ENST00000400540 NRSN2Q9GZP1 204 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 INTS2Q9H0H0 1204 aaKnown RBP12.27□□□□□ -0.45
LINC00544-201ENST00000400540 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 CTNND2Q9UQB3 1225 aa12.27□□□□□ -0.45
LINC00544-201ENST00000400540 A0A1B0GVM2 712 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 TCAF2A6NFQ2 919 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 RNF103O00237 685 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 P4HA2O15460 535 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 THAP12O43422 761 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 SIGLEC6O43699 453 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 BNIP3LO60238 219 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 GRAP2O75791 330 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 CTSLP07711 333 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 CDK4P11802 303 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 PRLRP16471 622 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 GLDCP23378 1020 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 ACP1P24666 158 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 GNA15P30679 374 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 NNMTP40261 264 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 PLK1P53350 603 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 CETN1Q12798 172 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 KCNH2Q12809 1159 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 PDCLQ13371 301 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 STIM1Q13586 685 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 RABGAP1LQ5R372 815 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 GJB7Q6PEY0 223 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 TMEM110Q86TL2 294 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 TRIM69Q86WT6 500 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 DEFB106AQ8N104 65 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 SLC25A45Q8N413 288 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 SNIP1Q8TAD8 396 aaKnown RBP12.26□□□□□ -0.45
LINC00544-201ENST00000400540 STK32AQ8WU08 396 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 NELFBQ8WX92 580 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF606Q8WXB4 792 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 RFFLQ8WZ73 363 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 OR8D1Q8WZ84 308 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 DHTKD1Q96HY7 919 aaPredicted RBP12.26□□□□□ -0.45
LINC00544-201ENST00000400540 RPRD1AQ96P16 312 aaPredicted RBP12.26□□□□□ -0.45
LINC00544-201ENST00000400540 TRIM62Q9BVG3 475 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 KDM4CQ9H3R0 1056 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 FZD3Q9NPG1 666 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00544-201ENST00000400540 UCKL1Q9NWZ5 548 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 DDIT4Q9NX09 232 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 SLC25A13Q9UJS0 675 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 VANGL2Q9ULK5 521 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 CLCA2Q9UQC9 943 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
LINC00544-201ENST00000400540 PPP1R3GB7ZBB8 358 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms