RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SLC20A1Q8WUM9 679 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 CIDECQ96AQ7 238 aaPredicted RBP10.15□□□□□ -0.79
PTPRM-203ENST00000400060 PGBD4Q96DM1 585 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 ASB9Q96DX5 294 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 PNMA5Q96PV4 448 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 HGH1Q9BTY7 390 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 COQ10BQ9H8M1 238 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 EXOSC4Q9NPD3 245 aaKnown RBP10.15□□□□□ -0.79
PTPRM-203ENST00000400060 BLOC1S4Q9NUP1 217 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 MAD2L2Q9UI95 211 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.15□□□□□ -0.79
PTPRM-203ENST00000400060 FAM208AQ9UK61 1670 aaKnown RBP10.15□□□□□ -0.79
PTPRM-203ENST00000400060 TMEM131LA2VDJ0 1609 aa10.15□□□□□ -0.79
PTPRM-203ENST00000400060 CDH1P12830 882 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SDC4P31431 198 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 STILQ15468 1287 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 BMT2Q1RMZ1 405 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 FAM83EQ2M2I3 478 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SLC9A4Q6AI14 798 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 LINC00299Q6ZSB3 139 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PLEKHM3Q6ZWE6 761 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 USP43Q70EL4 1123 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 KRT74Q7RTS7 529 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SIMC1Q8NDZ2 872 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 MAGEE2Q8TD90 523 aaPredicted RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 UTP4Q969X6 686 aaKnown RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 RCN3Q96D15 328 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 STK32BQ9NY57 414 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 GMIPQ9P107 970 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PCDHA11Q9Y5I1 949 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 NWD1Q149M9 1564 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF99A8MXY4 864 aaPredicted RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 NDUFS2O75306 463 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 UGT2B11O75310 529 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 FKBP9O95302 570 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 IFNA7P01567 189 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PRKACAP17612 351 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 FGFR3P22607 806 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF45Q02386 682 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SCN1BQ07699 218 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 MERTKQ12866 999 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PDK1Q15118 436 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TLR1Q15399 786 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 VWA5B1Q5TIE3 1220 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SHQ1Q6PI26 577 aaKnown RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 MCPH1Q8NEM0 835 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PPHLN1Q8NEY8 458 aaKnown RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 RDM1Q8NG50 284 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 ADAMTS10Q9H324 1103 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 KRT84Q9NSB2 600 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 AQP12BA6NM10 295 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SNAP23O00161 211 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PLK4O00444 970 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 DNAJA2O60884 412 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TADA2AO75478 443 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 RBP1P09455 135 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 MSH3P20585 1137 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 RPS9P46781 194 aaKnown RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 CAPRIN1Q14444 709 aaKnown RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PSMD5Q16401 504 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 AGAP9Q5VTM2 703 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 AQP12AQ8IXF9 295 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 FAM9CQ8IZT9 166 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 ATP6V1E2Q96A05 226 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 ROPN1LQ96C74 230 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 MIPEPQ99797 713 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SENP6Q9GZR1 1112 aaPredicted RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 LRRC40Q9H9A6 602 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 KLHL11Q9NVR0 708 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TOR4AQ9NXH8 423 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 NUP50Q9UKX7 468 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 KRBA1A5PL33 1030 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TSPAN4O14817 238 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
PTPRM-203ENST00000400060 CCNCP24863 283 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 DNAJB2P25686 324 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 RALGDSQ12967 914 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TNFAIP1Q13829 316 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 SPARTQ8N0X7 666 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 EMC1Q8N766 993 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 AP3S1Q92572 193 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 PPP1R36Q96LQ0 422 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 TMEM121Q9BTD3 319 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 NARFQ9UHQ1 456 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 DNPEPQ9ULA0 475 aa10.14□□□□□ -0.79
PTPRM-203ENST00000400060 DIP2BQ9P265 1576 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 PTPN2P17706 415 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 GRIA3P42263 894 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MAPK10P53779 464 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 AGAP7PQ5VUJ5 663 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 LAYNQ6UX15 382 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 FAM196AQ6ZSG2 479 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 PARP8Q8N3A8 854 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 CNDP2Q96KP4 475 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 KAT8Q9H7Z6 458 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 CACYBPQ9HB71 228 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 INTS10Q9NVR2 710 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 FAM8A1Q9UBU6 413 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms