RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 EIF4BP23588 611 aaKnown RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 HOXA10P31260 410 aaPredicted RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 RANBP1P43487 201 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 MRPS15P82914 257 aaKnown RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 GTF2BQ00403 316 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 FMO1Q01740 532 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 TBL3Q12788 808 aaKnown RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 BOP1Q14137 746 aaKnown RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 CATSPERGQ6ZRH7 1159 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 ANKS3Q6ZW76 656 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 ZNF410Q86VK4 478 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 DENND1CQ8IV53 801 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 HERC6Q8IVU3 1022 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 BRSK2Q8IWQ3 736 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 CENPLQ8N0S6 344 aaPredicted RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 OR9Q1Q8NGQ5 310 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 PRCCQ92733 491 aaPredicted RBP3.32□□□□□ -1.88
KNL1-202ENST00000399668 DPF3Q92784 378 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 TMEM79Q9BSE2 394 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 TINF2Q9BSI4 451 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 ASB7Q9H672 318 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 GDF3Q9NR23 364 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 CATSPERZQ9NTU4 200 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 RIC8BQ9NVN3 520 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 PCYOX1Q9UHG3 505 aa3.32□□□□□ -1.88
KNL1-202ENST00000399668 KCPQ6ZWJ8 1503 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FAM237AA0A1B0GTK4 181 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 C2orf71A6NGG8 1288 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SPATA31C2B4DYI2 1134 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BUD23O43709 281 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 RASSF9O75901 435 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 USP1O94782 785 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 OAZ1P54368 228 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FKBP1AP62942 108 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 HPCAP84074 193 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 DUSP4Q13115 394 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ACOX1Q15067 660 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BNIPLQ7Z465 357 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZDHHC17Q8IUH5 632 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 KIAA2013Q8IYS2 634 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 KATNAL2Q8IYT4 538 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PHACTR4Q8IZ21 702 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 AENQ8WTP8 325 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 SOCS4Q8WXH5 440 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 C18orf25Q96B23 403 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 CPNE1Q99829 537 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 HGH1Q9BTY7 390 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ULBP1Q9BZM6 244 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FHDC1Q9C0D6 1143 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 ELOVL4Q9GZR5 314 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CCDC134Q9H6E4 229 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ACTR8Q9H981 624 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PARVBQ9HBI1 364 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ERVK-5Q9HDB9 667 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PALMDQ9NP74 551 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BATF3Q9NR55 127 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TAS2R13Q9NYV9 303 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 DRG1Q9Y295 367 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 PRR14LQ5THK1 2151 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MAGEB16A2A368 324 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZMPSTE24O75844 475 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ACADMP11310 421 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CDH2P19022 906 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 FMO4P31512 558 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 S100A5P33763 92 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MMP14P50281 582 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 HIRAP54198 1017 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 NCKAP1LP55160 1127 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MCL1Q07820 350 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MGAT5Q09328 741 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BFSP2Q13515 415 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PLCL1Q15111 1095 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TTMPQ5BVD1 217 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CACHD1Q5VU97 1274 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 UNC5AQ6ZN44 842 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MAP4K3Q8IVH8 894 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 P3H2Q8IVL5 708 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SLC22A9Q8IVM8 553 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 LGI2Q8N0V4 545 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SPATA6LQ8N4H0 392 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ATG16L2Q8NAA4 619 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NKX2-3Q8TAU0 364 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PPP1R10Q96QC0 940 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 IGFLR1Q9H665 355 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 GOLGA2P5Q9HBQ8 144 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MID1IP1Q9NPA3 183 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ETNK2Q9NVF9 386 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NMRK1Q9NWW6 199 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SCN3BQ9NY72 215 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TRPM5Q9NZQ8 1165 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TRPC4Q9UBN4 977 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 LNPEPQ9UIQ6 1025 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TRIM17Q9Y577 477 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 DYSFO75923 2080 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 YDJCA8MPS7 323 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PLSCR1O15162 318 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NKRFO15226 690 aaKnown RBP eCLIP3.31□□□□□ -1.88
KNL1-202ENST00000399668 TREHO43280 583 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms