RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CHPFQ8IZ52 775 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 APCDD1Q8J025 514 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 ALLCQ8N6M5 410 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 TXNDC5Q8NBS9 432 aaKnown RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 OR52K2Q8NGK3 314 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 HSPH1Q92598 858 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 DESI2Q9BSY9 194 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 ACE2Q9BYF1 805 aaPredicted RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 MUC3BQ9H195 1237 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 TMEM245Q9H330 911 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 SALL4Q9UJQ4 1053 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 SLC8A2Q9UPR5 921 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 ZSCAN5CA6NGD5 496 aaPredicted RBP18.11■□□□□ 0.49
CTNS-203ENST00000399306 DAPK3O43293 454 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 SPOPO43791 374 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 RAMP2O60895 175 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 ADAM23O75077 832 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 GOT1P17174 413 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 ERCC2P18074 760 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 COMTP21964 271 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 NNMTP40261 264 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 CLCN6P51797 869 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 CDH6P55285 790 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 GEMIN4P57678 1058 aaKnown RBP18.11■□□□□ 0.49
CTNS-203ENST00000399306 ST8SIA6P61647 398 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 KRT81Q14533 505 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 PTPRNQ16849 979 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 SMTNL2Q2TAL5 461 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 DAAM2Q86T65 1068 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 METTL3Q86U44 580 aaKnown RBP18.11■□□□□ 0.49
CTNS-203ENST00000399306 MAML2Q8IZL2 1156 aaPredicted RBP18.11■□□□□ 0.49
CTNS-203ENST00000399306 SYCE1Q8N0S2 351 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 NELL1Q92832 810 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 FAF2Q96CS3 445 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 CSPG4P5Q96PW8 444 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 POLMQ9NP87 494 aaPredicted RBP18.11■□□□□ 0.49
CTNS-203ENST00000399306 EBF1Q9UH73 591 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 SUN2Q9UH99 717 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 VPS28Q9UK41 221 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 TFR2Q9UP52 801 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 ERVW-1Q9UQF0 538 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 HS3ST2Q9Y278 367 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 STON1Q9Y6Q2 735 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 DUSP10Q9Y6W6 482 aa18.11■□□□□ 0.49
CTNS-203ENST00000399306 TMEM110-MUSTN1A8MSY1 372 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 K7ESF4 209 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 SGK1O00141 431 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 TDGF1P13385 188 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 IL12RB1P42701 662 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 SATB1Q01826 763 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 CCDC173Q0VFZ6 552 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 POLD3Q15054 466 aaPredicted RBP18.1■□□□□ 0.49
CTNS-203ENST00000399306 ANGPT1Q15389 498 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 AFMIDQ63HM1 303 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 RETSATQ6NUM9 610 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 LRRC57Q8N9N7 239 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 KCTD6Q8NC69 237 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 KIAA1524Q8TCG1 905 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 ARHGEF2Q92974 986 aaKnown RBP18.1■□□□□ 0.49
CTNS-203ENST00000399306 MYO19Q96H55 970 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 MRGPRX3Q96LB0 322 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 PSMB7Q99436 277 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 LRRC19Q9H756 370 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 CD248Q9HCU0 757 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 NDFIP2Q9NV92 336 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 SLC25A13Q9UJS0 675 aa18.1■□□□□ 0.49
CTNS-203ENST00000399306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
CTNS-203ENST00000399306 A0A0D9SEW6 157 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 TARSL2A2RTX5 802 aaKnown RBP18.09■□□□□ 0.49
CTNS-203ENST00000399306 DCLK1O15075 740 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 ATP9BO43861 1147 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 ZMPSTE24O75844 475 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 ALDH1A2O94788 518 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 APBB3O95704 486 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
CTNS-203ENST00000399306 HOXB2P14652 356 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 KDELR1P24390 212 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 IL4RP24394 825 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 SERPINB6P35237 376 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 DPYSL3Q14195 570 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 STARD3Q14849 445 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 FNDC3BQ53EP0 1204 aaKnown RBP18.09■□□□□ 0.49
CTNS-203ENST00000399306 SERPINA13PQ6UXR4 307 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 CPNE8Q86YQ8 564 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 LRRC49Q8IUZ0 686 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 CASKIN2Q8WXE0 1202 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 NOL6Q9H6R4 1146 aaKnown RBP18.09■□□□□ 0.49
CTNS-203ENST00000399306 ATP13A1Q9HD20 1204 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 DNAI1Q9UI46 699 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 VPS51Q9UID3 782 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 HPCAL4Q9UM19 191 aa18.09■□□□□ 0.49
CTNS-203ENST00000399306 FANCMQ8IYD8 2048 aa18.08■□□□□ 0.49
CTNS-203ENST00000399306 MUC6Q6W4X9 2439 aa18.08■□□□□ 0.49
CTNS-203ENST00000399306 A0A1W2PQF6 199 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 CCDC66A2RUB6 948 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 BUB1O43683 1085 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 KDELR3O43731 214 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 NAP1L1P55209 391 aaKnown RBP18.08■□□□□ 0.48
CTNS-203ENST00000399306 CAMK2GQ13555 558 aaPredicted RBP18.08■□□□□ 0.48
CTNS-203ENST00000399306 HNRNPA1L2Q32P51 320 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms