RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TUBP50607 506 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 KIF19Q2TAC6 998 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 C9orf57Q5W0N0 161 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 BNC2Q6ZN30 1099 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ATPAF2Q8N5M1 289 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 PNPLA1Q8N8W4 532 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NPLOC4Q8TAT6 608 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NRG4Q8WWG1 115 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SENP8Q96LD8 212 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CPNE1Q99829 537 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TBL1YQ9BQ87 522 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CCDC106Q9BWC9 280 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SLC4A5Q9BY07 1137 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 C20orf27Q9GZN8 174 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CHST12Q9NRB3 414 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NUP188Q5SRE5 1749 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 IQCF3P0C7M6 154 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CTBP1Q13363 440 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ARHGAP36Q6ZRI8 547 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TAC4Q86UU9 113 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ZDHHC17Q8IUH5 632 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MTURNQ8N3F0 131 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 FBXO27Q8NI29 283 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SLC35F5Q8WV83 523 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 RCN3Q96D15 328 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NMRAL1Q9HBL8 299 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 S100A14Q9HCY8 104 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 LNPEPQ9UIQ6 1025 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 DLG5Q8TDM6 1919 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 XPO1O14980 1071 aaKnown RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 PTPN3P26045 913 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CNTFP26441 200 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CASP2P42575 452 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ETV4P43268 484 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 HDAC4P56524 1084 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 IYDQ6PHW0 289 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ULK2Q8IYT8 1036 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TRIML2Q8N7C3 387 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MAB21L3Q8N8X9 362 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TMEM174Q8WUU8 243 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CERS2Q96G23 380 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CNBD2Q96M20 576 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NUMBLQ9Y6R0 609 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SCN1AP35498 2009 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NWD2Q9ULI1 1742 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FAM95CA0A1B0GW59 222 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 UBA6A0AVT1 1052 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CCL22O00626 93 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 HMGB3O15347 200 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PROZP22891 400 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SNX17Q15036 470 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SLC9A4Q6AI14 798 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SLC26A9Q7LBE3 791 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FAM35AQ86V20 835 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ZSCAN18Q8TBC5 510 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FCRL3Q96P31 734 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 NDNQ99608 321 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 BCAP29Q9UHQ4 241 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SAC3D1A6NKF1 404 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 BTBD19C9JJ37 291 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FKBP6O75344 327 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 GCATO75600 419 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CHRNGP07510 517 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FGF3P11487 239 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 NOS2P35228 1153 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TEDDM1Q5T9Z0 273 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 OLFML1Q6UWY5 402 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 THEM5Q8N1Q8 247 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SPATA22Q8NHS9 363 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PABPC5Q96DU9 382 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 HSFY1Q96LI6 401 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 VTA1Q9NP79 307 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CYLDQ9NQC7 956 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ARHGAP26Q9UNA1 814 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ACOT9Q9Y305 439 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 LAMA2P24043 3122 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SMNDC1O75940 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SORBS2O94875 1100 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 BDNFP23560 247 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PRKCHP24723 683 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 NMBRP28336 390 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ADRA1BP35368 520 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CCNFP41002 786 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 IRX1P78414 480 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TSTA3Q13630 321 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SPDYAQ5MJ70 313 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SLC30A9Q6PML9 568 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 C16orf89Q6UX73 402 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 GK5Q6ZS86 529 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 DDIASQ8IXT1 998 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SHCBP1Q8NEM2 672 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 OR6P1Q8NGX9 317 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PIWIL2Q8TC59 973 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SKA1Q96BD8 255 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 AGAP2Q99490 1192 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 GATA5Q9BWX5 397 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FSD1LQ9BXM9 530 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms