RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 AP5Z1O43299 807 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 ATP9BO43861 1147 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 SRGAP2O75044 1071 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 SERPING1P05155 500 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 CD6P30203 668 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 CASP14P31944 242 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 DHPSP49366 369 aaPredicted RBP17.15■□□□□ 0.34
APTR-201ENST00000398043 ST8SIA6P61647 398 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 RPL6Q02878 288 aaKnown RBP17.15■□□□□ 0.34
APTR-201ENST00000398043 ARL13BQ3SXY8 428 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 TFAP2DQ7Z6R9 452 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 PPP1R9BQ96SB3 815 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 ZYG11BQ9C0D3 744 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 RXFP3Q9NSD7 469 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 TMEM74BQ9NUR3 256 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 DLL3Q9NYJ7 618 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 ARHGAP20Q9P2F6 1191 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 ADAMTS1Q9UHI8 967 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 PILRBQ9UKJ0 227 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 CACNA1AO00555 2505 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 PCNX2A6NKB5 2137 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 A0A087X0T9 212 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 EDDM13A0A1B0GTR0 161 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 FOXD2O60548 495 aaPredicted RBP17.14■□□□□ 0.33
APTR-201ENST00000398043 LRIG2O94898 1065 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 RHOCP08134 193 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 FAM228BP0C875 321 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 VAV1P15498 845 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 ITPKAP23677 461 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 ZBTB16Q05516 673 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 SEMA3BQ13214 749 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 TCEAL6Q6IPX3 200 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 DCUN1D2Q6PH85 259 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 ZNF783Q6ZMS7 281 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 TMC6Q7Z403 805 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 CYP2U1Q7Z449 544 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 PYROXD2Q8N2H3 581 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 RNF214Q8ND24 703 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 FNIP1Q8TF40 1166 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 TCEAL3Q969E4 200 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 TOE1Q96GM8 510 aaKnown RBP17.14■□□□□ 0.33
APTR-201ENST00000398043 TRIM7Q9C029 511 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 RETREG1Q9H6L5 497 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 NDFIP2Q9NV92 336 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 VPS28Q9UK41 221 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 FZD10Q9ULW2 581 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 HS3ST2Q9Y278 367 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.14■□□□□ 0.33
APTR-201ENST00000398043 TMEM131Q92545 1883 aa17.14■□□□□ 0.33
APTR-201ENST00000398043 ILVBLA1L0T0 632 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 PRR5-ARHGAP8B1AHC4 643 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 C10orf142B7Z368 130 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 GDF9O60383 454 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 SNAP91O60641 907 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 ZMPSTE24O75844 475 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 OXTRP30559 389 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 OR1E1P30953 314 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 L1CAMP32004 1257 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 ARHGAP8P85298 464 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 TDRD12Q587J7 1177 aaKnown RBP17.13■□□□□ 0.33
APTR-201ENST00000398043 C6orf118Q5T5N4 469 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 LYSMD4Q5XG99 296 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 ZNF776Q68DI1 518 aaPredicted RBP17.13■□□□□ 0.33
APTR-201ENST00000398043 SPECC1LQ69YQ0 1117 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 CYP4V2Q6ZWL3 525 aaPredicted RBP17.13■□□□□ 0.33
APTR-201ENST00000398043 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 CACUL1Q86Y37 369 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 SYT12Q8IV01 421 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 VSTM4Q8IW00 320 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 SH2D3CQ8N5H7 860 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 DCAF4L2Q8NA75 395 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 DNAJC7Q99615 494 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 TMEM248Q9NWD8 314 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 CNOT8Q9UFF9 292 aaKnown RBP17.13■□□□□ 0.33
APTR-201ENST00000398043 VPS51Q9UID3 782 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 CABIN1Q9Y6J0 2220 aa17.13■□□□□ 0.33
APTR-201ENST00000398043 ANKRD36A6QL64 1941 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 PATE3B3GLJ2 98 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 MT-CO1P00395 513 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 TPM3P06753 285 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 MYBL1P10243 752 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 RHOQP17081 205 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 GLDCP23378 1020 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 AIF1P55008 147 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 RSPO4Q2I0M5 234 aaPredicted RBP17.12■□□□□ 0.33
APTR-201ENST00000398043 STK40Q8N2I9 435 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 CADM4Q8NFZ8 388 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 OR7D4Q8NG98 312 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 PIGKQ92643 395 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 ZNF653Q96CK0 615 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 PEBP4Q96S96 227 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 ACE2Q9BYF1 805 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms