RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SPATA2LQ8IUW3 424 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TADA1Q96BN2 335 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 MRPL45Q9BRJ2 306 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ZYG11BQ9C0D3 744 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ZNF212Q9UDV6 495 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 AP3M1Q9Y2T2 418 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 A0A1B0GVM2 712 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TCAF2A6NFQ2 919 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 M0QYT0 321 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 STAMBPO95630 424 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 EPHB2P29323 1055 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 NUMBP49757 651 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CLCN5P51795 746 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 GBE1Q04446 702 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 BBS9Q3SYG4 887 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CCDC13Q8IYE1 715 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 C9orf72Q96LT7 481 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 MAGEB10Q96LZ2 347 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 UNC93B1Q9H1C4 597 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TBC1D30Q9Y2I9 924 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 YJEFN3A6XGL0 299 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 GFRA2O00451 464 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 COPEO14579 308 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ALDH1A3P47895 512 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SERPINB8P50452 374 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CLCN4P51793 760 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 POU4F1Q01851 419 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 RETSATQ6NUM9 610 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CD300LGQ6UXG3 332 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SCUBE3Q8IX30 993 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ATG4AQ8WYN0 398 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SAMD11Q96NU1 681 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 MCMBPQ9BTE3 642 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 B3GNT5Q9BYG0 378 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PRDM5Q9NQX1 630 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 RAD18Q9NS91 495 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ST14Q9Y5Y6 855 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 MYO16Q9Y6X6 1858 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 KIAA0355O15063 1070 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SERPINE1P05121 402 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ACAT1P24752 427 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 IRX4P78413 519 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CCDC149Q6ZUS6 474 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 RAB3IPQ96QF0 476 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PEBP4Q96S96 227 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 RC3H2Q9HBD1 1191 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ETNK1Q9HBU6 452 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 GLOD4Q9HC38 313 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 FAM49BQ9NUQ9 324 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ABT1Q9ULW3 272 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 QSOX1O00391 747 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ABLIM3O94929 683 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 UNC5CO95185 931 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 KLHL2O95198 593 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TAC1P20366 129 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SLC11A2P49281 568 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 NEK3P51956 506 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ATP6V0D1P61421 351 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 DNAL1Q4LDG9 190 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TAF1BQ53T94 588 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 RHEBL1Q8TAI7 183 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PIWIL2Q8TC59 973 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SEC16BQ96JE7 1060 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 LYSMD1Q96S90 227 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TTC1Q99614 292 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 C1QTNF3Q9BXJ4 246 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 VPS37BQ9H9H4 285 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 FLRT1Q9NZU1 646 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TLDC2A0PJX2 215 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SERPINF2P08697 491 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CHN1P15882 459 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CHKAP35790 457 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 OSTNP61366 133 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 BNIP1Q12981 228 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 ZKSCAN8Q15776 578 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 KBTBD12Q3ZCT8 623 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 GALNTL6Q49A17 601 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PPP6R3Q5H9R7 873 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CNKSR3Q6P9H4 555 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 OSTM1Q86WC4 334 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CPXM2Q8N436 756 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 FBXO36Q8NEA4 188 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 HEXDCQ8WVB3 486 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM169Q96HH4 297 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TRIB3Q96RU7 358 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 KLHL8Q9P2G9 620 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 LNPEPQ9UIQ6 1025 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PRDM4Q9UKN5 801 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 GINS2Q9Y248 185 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 KCNN4O15554 427 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CKBP12277 381 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 OCRLQ01968 901 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 FKBP9P1Q75LS8 142 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 CBARPQ8N350 705 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SH2D3CQ8N5H7 860 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 IMP4Q96G21 291 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 TSNARE1Q96NA8 513 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PPP1R16BQ96T49 567 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms