RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 UPK3BL1B0FP48 263 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 UPK3BL2E5RIL1 263 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 GIPC1O14908 333 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 CER1O95813 267 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 CALB1P05937 261 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 CHRNB2P17787 502 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 CD27P26842 260 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 OR1E1P30953 314 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-205ENST00000395794 ATP11AP98196 1134 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 HNRNPDQ14103 355 aaKnown RBP14.12□□□□□ -0.15
CXCL12-205ENST00000395794 NCAPHQ15003 741 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 FAM46CQ5VWP2 391 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 KIAA0895LQ68EN5 471 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
CXCL12-205ENST00000395794 ADAT2Q7Z6V5 191 aaKnown RBP14.12□□□□□ -0.15
CXCL12-205ENST00000395794 SETD3Q86TU7 594 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-205ENST00000395794 EMC1Q8N766 993 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 OR8D1Q8WZ84 308 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 PTPRN2Q92932 1015 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 BIRC7Q96CA5 298 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 CCDC114Q96M63 670 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 BPIFA3Q9BQP9 254 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 SELENOOQ9BVL4 669 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 TMEM63CQ9P1W3 806 aa14.12□□□□□ -0.15
CXCL12-205ENST00000395794 TNRC6BQ9UPQ9 1833 aaKnown RBP14.11□□□□□ -0.15
CXCL12-205ENST00000395794 DRGXA6NNA5 263 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 E9PAM4 449 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 C1QTNF3-AMACRE9PGA6 284 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 CNTN5O94779 1100 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 KRT3P12035 628 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 FERP16591 822 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 GOT1P17174 413 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 DESP17661 470 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 PMLP29590 882 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 IRAK1P51617 712 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 CKAP5Q14008 2032 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 DLG2Q15700 870 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 CDO1Q16878 200 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 CLEC16AQ2KHT3 1053 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ALFQ53S48 1182 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 TFAP2DQ7Z6R9 452 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 PHLDB2Q86SQ0 1253 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 FAM131BQ86XD5 332 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ATP11CQ8NB49 1132 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 OR2I1PQ8NGU4 316 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 OR2T34Q8NGX1 318 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 RXFP2Q8WXD0 754 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 SKA1Q96BD8 255 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ALG14Q96F25 216 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 AGPAT1Q99943 283 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ADAM33Q9BZ11 813 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ZYG11BQ9C0D3 744 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 NEUROG2Q9H2A3 272 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 OSGEPQ9NPF4 335 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ANLNQ9NQW6 1124 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 TPX2Q9ULW0 747 aaKnown RBP14.11□□□□□ -0.15
CXCL12-205ENST00000395794 PCDHB9Q9Y5E1 797 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 SNX10Q9Y5X0 201 aa14.11□□□□□ -0.15
CXCL12-205ENST00000395794 MUC22E2RYF6 1773 aaPredicted RBP14.11□□□□□ -0.15
CXCL12-205ENST00000395794 ATP9BO43861 1147 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 BNIP3LO60238 219 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 UNGP13051 313 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-205ENST00000395794 ATP1A3P13637 1013 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 VAV1P15498 845 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 CSNK1EP49674 416 aaKnown RBP14.1□□□□□ -0.15
CXCL12-205ENST00000395794 GALCP54803 685 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 NCEH1Q6PIU2 408 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 ZNF783Q6ZMS7 281 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 PIP4P1Q86T03 277 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 PHF13Q86YI8 300 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-205ENST00000395794 OR14C36Q8NHC7 312 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 FRS2Q8WU20 508 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 CNTNAP3BQ96NU0 1288 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 SPON2Q9BUD6 331 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 CNTNAP3Q9BZ76 1288 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 GAREM1Q9H706 876 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 TM9SF3Q9HD45 589 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 MPP6Q9NZW5 540 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 ADAMTS1Q9UHI8 967 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 OR51B4Q9Y5P0 310 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 NCOR2Q9Y618 2525 aa14.1□□□□□ -0.15
CXCL12-205ENST00000395794 IGLV3-10A0A075B6K4 115 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3DA0A087WVF3 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3IA0A087WXS9 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3EA0A087X179 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3KA0A087X1G2 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 A0A1B0GVT2 93 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ILVBLA1L0T0 632 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3FA6NER0 549 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 C2CD4BA6NLJ0 364 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3LB9A6J9 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 I6L893 689 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ALOX15BO15296 676 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ENDOD1O94919 500 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3HP0C7X1 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ADRA1BP35368 520 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 PTPN9P43378 593 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 RECQLP46063 649 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms