RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ATP6V1E2Q96A05 226 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 HSPBAP1Q96EW2 488 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 ANKRD27Q96NW4 1050 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TRAPPC9Q96Q05 1148 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CLIC3O95833 236 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 THRAP10827 490 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 NCAM1P13591 858 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CDH13P55290 713 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 ARPP19P56211 112 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CLDN10P78369 228 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 RBP5P82980 135 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 KLF10Q13118 480 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 PACS1Q6VY07 963 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 AFAP1L2Q8N4X5 818 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 PDCD6IPQ8WUM4 868 aaKnown RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 PTCD3Q96EY7 689 aaKnown RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 PCDH18Q9HCL0 1135 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 SNX10Q9Y5X0 201 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 SLC15A5A6NIM6 579 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CLDN5O00501 218 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 TRIM13O60858 407 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CARTPTQ16568 116 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 NADK2Q4G0N4 442 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 SLC44A4Q53GD3 710 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 ACBD5Q5T8D3 534 aaPredicted RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CDC26Q8NHZ8 85 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 ZNF398Q8TD17 642 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 SKA1Q96BD8 255 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 EFCAB1Q9HAE3 211 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 KCNK13Q9HB14 408 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 NMRAL1Q9HBL8 299 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 SNX15Q9NRS6 342 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 DCDC2Q9UHG0 476 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 DSEQ9UL01 958 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 TIPRLO75663 272 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 MAP4P27816 1152 aaKnown RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 IDH3AP50213 366 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 NOMO1Q15155 1222 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 DEFB106AQ8N104 65 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 ARFGAP1Q8N6T3 406 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 GPRC5AQ8NFJ5 357 aa13.48□□□□□ -0.25
NFKB1-202ENST00000394820 NOL11Q9H8H0 719 aaKnown RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 RBMX2Q9Y388 322 aaKnown RBP13.48□□□□□ -0.25
NFKB1-202ENST00000394820 IGKV6D-21A0A0A0MT36 114 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 CCL15-CCL14A0A0B4J2E2 113 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 ASB14A6NK59 587 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 NR5A2O00482 541 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 FDFT1P37268 417 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 GRIA4P48058 902 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 STILQ15468 1287 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 CCL15Q16663 113 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 OR52E8Q6IFG1 317 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 TP53INP2Q8IXH6 220 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 ENDOVQ8N8Q3 282 aaKnown RBP13.47□□□□□ -0.25
NFKB1-202ENST00000394820 DCBLD1Q8N8Z6 715 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
NFKB1-202ENST00000394820 VPS50Q96JG6 964 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 CHRAC1Q9NRG0 131 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 CHCHD3Q9NX63 227 aaKnown RBP13.47□□□□□ -0.25
NFKB1-202ENST00000394820 ARHGEF38Q9NXL2 777 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 TUBGCP4Q9UGJ1 667 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 POLR2AP24928 1970 aaKnown RBP13.47□□□□□ -0.25
NFKB1-202ENST00000394820 IL18RAPO95256 599 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 GRIA3P42263 894 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 THOP1P52888 689 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 ADIGQ0VDE8 80 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 PLCL1Q15111 1095 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 SH3D19Q5HYK7 790 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 C16orf89Q6UX73 402 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 FASTKD5Q7L8L6 764 aaKnown RBP13.47□□□□□ -0.25
NFKB1-202ENST00000394820 SLC41A1Q8IVJ1 513 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 SLC2A14Q8TDB8 520 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 FZD8Q9H461 694 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 UTP6Q9NYH9 597 aaKnown RBP13.47□□□□□ -0.25
NFKB1-202ENST00000394820 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
NFKB1-202ENST00000394820 EVPLQ92817 2033 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 C1orf232A0A0U1RR37 186 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 PDHXO00330 501 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 CNMDO75829 334 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 LTFP02788 710 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 ME2P23368 584 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 PIK3R1P27986 724 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 CCNA1P78396 465 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 TNFAIP2Q03169 654 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 GRIK4Q16099 956 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms