RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 UBR7Q8N806 425 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 FNIP1Q8TF40 1166 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 IP6K1Q92551 441 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 DPF3Q92784 378 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CFAP36Q96G28 342 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 DGCR6LQ9BY27 220 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ADA2Q9NZK5 511 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ATAD5Q96QE3 1844 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ZBTB39O15060 712 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 PDE8BO95263 885 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 BPGMP07738 259 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 PSMC6P62333 389 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 SNX17Q15036 470 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 CCDC142Q17RM4 750 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 ATAD3CQ5T2N8 411 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 DESI1Q6ICB0 168 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 TMEM126BQ8IUX1 230 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 KYQ8NBH2 561 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 RAB34Q9BZG1 259 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 FOXP3Q9BZS1 431 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 LHPPQ9H008 270 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 ATP13A2Q9NQ11 1180 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 RPRD1BQ9NQG5 326 aaKnown RBP12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 BAZ2AQ9UIF9 1905 aaKnown RBP12.77□□□□□ -0.36
SLC28A1-203ENST00000394573 KBTBD13C9JR72 458 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 PHGDHO43175 533 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 LIASO43766 372 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 AVILO75366 819 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 SLITRK3O94933 977 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 CCDC159P0C7I6 412 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 ME2P23368 584 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 SLC1A6P48664 564 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 CDK10Q15131 360 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 Q5BKY6 102 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 IDO2Q6ZQW0 420 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 FAM109AQ8N4B1 249 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 CELF2-AS1Q8N7Q2 184 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 MINDY2Q8NBR6 621 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 ELMO1Q92556 727 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 PIK3R3Q92569 461 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 TBATAQ96M53 351 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 RTKNQ9BST9 563 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 WDR12Q9GZL7 423 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 SLC38A10Q9HBR0 1119 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 ZNF221Q9UK13 617 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 TCAF1Q9Y4C2 921 aa12.77□□□□□ -0.37
SLC28A1-203ENST00000394573 ARPC4-TTLL3A0A0A6YYG9 625 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 TRIM64BA6NI03 449 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 CXorf49A8MYA2 514 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 TK2O00142 265 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 BCAS1O75363 584 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 TP53P04637 393 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 CCND2P30279 289 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 ARRB2P32121 409 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 ELK3P41970 407 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 DYNLT1P63172 113 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 FCHO2Q0JRZ9 810 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 DPYSQ14117 519 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 HERC3Q15034 1050 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 CATSPEREQ5SY80 951 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 MROH9Q5TGP6 573 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 KCTD20Q7Z5Y7 419 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 REXO1Q8N1G1 1221 aaKnown RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 OR13F1Q8NGS4 319 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 OR2T34Q8NGX1 318 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 HDAC11Q96DB2 347 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 YME1L1Q96TA2 773 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 ADI1Q9BV57 179 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 VANGL2Q9ULK5 521 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 PCDHGA10Q9Y5H3 936 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 SYNCRIPO60506 623 aaKnown RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 FOSL1P15407 271 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 M6PRP20645 277 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 TTKP33981 857 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 GTF2IP78347 998 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 PIGFQ07326 219 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 POLD3Q15054 466 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 SLC9B1Q4ZJI4 515 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 TEDDM1Q5T9Z0 273 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 ARCQ7LC44 396 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 USP17L1Q7RTZ2 530 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 TCAIMQ8N3R3 496 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 DAGLBQ8NCG7 672 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
SLC28A1-203ENST00000394573 POLMQ9NP87 494 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms