RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
CCT4-201ENST00000394440 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 ARHGAP42A6NI28 874 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 PAPOLAP51003 745 aaKnown RBP15.29■□□□□ 0.04
CCT4-201ENST00000394440 KCNQ1P51787 676 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 TIGD7Q6NT04 549 aaPredicted RBP15.29■□□□□ 0.04
CCT4-201ENST00000394440 CYS1Q717R9 158 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 FATE1Q969F0 183 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 STAMBPL1Q96FJ0 436 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 CCDC134Q9H6E4 229 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 CASS4Q9NQ75 786 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.044e-7■□□□□ 8.2
CCT4-201ENST00000394440 MRPL17Q9NRX2 175 aaKnown RBP15.29■□□□□ 0.04
CCT4-201ENST00000394440 INTS9Q9NV88 658 aaKnown RBP15.29■□□□□ 0.04
CCT4-201ENST00000394440 MAD1L1Q9Y6D9 718 aa15.29■□□□□ 0.04
CCT4-201ENST00000394440 SDR42E2A6NKP2 422 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 COCHO43405 550 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 PEX11BO96011 259 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 DNAJB2P25686 324 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MSH2P43246 934 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 HECTD3Q5T447 861 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 BCAS4Q8TDM0 211 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MRRFQ96E11 262 aaKnown RBP15.28■□□□□ 0.04
CCT4-201ENST00000394440 MYEOVQ96EZ4 313 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 SMYD2Q9NRG4 433 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 DONSONQ9NYP3 566 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MYLKQ15746 1914 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 TEX28O15482 410 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 FGF18O76093 207 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MGAT1P26572 445 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 SEC24CP53992 1094 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 OLIG2Q13516 323 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 ZSCAN26Q16670 478 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 TFAP2DQ7Z6R9 452 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 CCNJLQ8IV13 435 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 CLP1Q92989 425 aaKnown RBP15.28■□□□□ 0.04
CCT4-201ENST00000394440 OXNAD1Q96HP4 312 aaPredicted RBP15.28■□□□□ 0.04
CCT4-201ENST00000394440 KIF9Q9HAQ2 790 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MOCS1Q9NZB8 636 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 TRPM5Q9NZQ8 1165 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 STK39Q9UEW8 545 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 IPO11Q9UI26 975 aaKnown RBP15.28■□□□□ 0.04
CCT4-201ENST00000394440 PCDHB12Q9Y5F1 795 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 INSL5Q9Y5Q6 135 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 MIA3Q5JRA6 1907 aa15.28■□□□□ 0.04
CCT4-201ENST00000394440 FAM159BA6NKW6 160 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 ALDH1A2O94788 518 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 OAS1P00973 400 aaKnown RBP15.27■□□□□ 0.04
CCT4-201ENST00000394440 CTSAP10619 480 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 KRT15P19012 456 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 TACR2P21452 398 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 IFNAR2P48551 515 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 TWF1Q12792 350 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 PLD1Q13393 1074 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 PPIGQ13427 754 aaKnown RBP eCLIP15.27■□□□□ 0.041e-11■□□□□ 9.7
CCT4-201ENST00000394440 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 FAM133BQ5BKY9 247 aaKnown RBP15.27■□□□□ 0.04
CCT4-201ENST00000394440 TRMT10BQ6PF06 316 aaKnown RBP15.27■□□□□ 0.04
CCT4-201ENST00000394440 CHSY1Q86X52 802 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 OR52K1Q8NGK4 314 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 USP33Q8TEY7 942 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 FCRL5Q96RD9 977 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 PPANQ9NQ55 473 aaKnown RBP15.27■□□□□ 0.04
CCT4-201ENST00000394440 PIH1D1Q9NWS0 290 aaKnown RBP15.27■□□□□ 0.04
CCT4-201ENST00000394440 SYBUQ9NX95 663 aa15.27■□□□□ 0.04
CCT4-201ENST00000394440 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 A0A1W2PPM1 405 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 CXorf49A8MYA2 514 aaPredicted RBP15.27■□□□□ 0.03
CCT4-201ENST00000394440 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.03
CCT4-201ENST00000394440 ACSL4O60488 711 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 FGBP02675 491 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 SLC18A1P54219 525 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 SESN2P58004 480 aaPredicted RBP15.27■□□□□ 0.03
CCT4-201ENST00000394440 CRADDP78560 199 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 VEPH1Q14D04 833 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 TMEM150AQ86TG1 271 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 PSMG2Q969U7 264 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 HMCESQ96FZ2 354 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 RPRD1AQ96P16 312 aaPredicted RBP15.27■□□□□ 0.03
CCT4-201ENST00000394440 NAT9Q9BTE0 207 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 ZNF180Q9UJW8 692 aa15.27■□□□□ 0.03
CCT4-201ENST00000394440 MTCL1Q9Y4B5 1905 aaKnown RBP15.27■□□□□ 0.03
CCT4-201ENST00000394440 ZBBXA8MT70 800 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 USP12O75317 370 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 HLA-DQB2P05538 268 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 PGAM1P18669 254 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 SLC6A4P31645 630 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 PPP3CCP48454 512 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 CREMQ03060 361 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 OTOP3Q7RTS5 596 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 SLC26A11Q86WA9 606 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 LRRC6Q86X45 466 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 FIBCD1Q8N539 461 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 PLD4Q96BZ4 506 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 RABEP2Q9H5N1 569 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 LRRC40Q9H9A6 602 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms