RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 XKR9Q5GH70 373 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 TAF7LQ5H9L4 462 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 CT47A1Q5JQC4 288 aaPredicted RBP0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 TCTEX1D4Q5JR98 221 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 SYDE2Q5VT97 1194 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 KHDRBS2Q5VWX1 349 aaKnown RBP0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 C11orf53Q8IXP5 236 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 PGBD5Q8N414 524 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 ZNF441Q8N8Z8 693 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 LNX1Q8TBB1 728 aaPredicted RBP0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 LINC00479Q96M42 142 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 WDR24Q96S15 920 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 RBM4BQ9BQ04 359 aaKnown RBP0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 ABHD14AQ9BUJ0 271 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 KRTAP4-1Q9BYQ7 146 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 SLC13A1Q9BZW2 595 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 ERVMER34-1Q9H9K5 563 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 COL20A1Q9P218 1284 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 CRCT1Q9UGL9 99 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 CAPN11Q9UMQ6 739 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 ZNF711Q9Y462 761 aa0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 SRPRBQ9Y5M8 271 aaKnown RBP0.95□□□□□ -2.26
MIR548A3-201ENST00000385297 ATRXP46100 2492 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 COL16A1Q07092 1604 aaPredicted RBP0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 HNRNPCL2B2RXH8 293 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 C16orf97H3BN30 126 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 PYCARD-AS1I3L0S3 204 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 NR5A2O00482 541 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 PRKNO60260 465 aaPredicted RBP0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 PATE4P0C8F1 98 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 CEACAM8P31997 349 aaPredicted RBP0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 NLRP5P59047 1200 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 ZBTB17Q13105 803 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 GALNT3Q14435 633 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 SLC29A2Q14542 456 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 SYT16Q17RD7 645 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 C10orf76Q5T2E6 689 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 HEPHL1Q6MZM0 1159 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 METTL7BQ6UX53 244 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 NECAB2Q7Z6G3 386 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 JAZF1Q86VZ6 243 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 CDC20BQ86Y33 519 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 DENND1CQ8IV53 801 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 MIGA1Q8NAN2 632 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 OR13A1Q8NGR1 328 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 RFWD2Q8NHY2 731 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 FGFBP3Q8TAT2 258 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 SLC35F5Q8WV83 523 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 KLHL29Q96CT2 875 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 MVB12AQ96EY5 273 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 TXNDC15Q96J42 360 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 FAM227BQ96M60 508 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 FOXN4Q96NZ1 517 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 CGRRF1Q99675 332 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 ZNF304Q9HCX3 659 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 TMEM160Q9NX00 188 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 SLC5A4Q9NY91 659 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 STAP2Q9UGK3 403 aa0.94□□□□□ -2.26
MIR548A3-201ENST00000385297 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 DYTNA2CJ06 578 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 TRIM43BA6NCK2 446 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 KCNJ18B7U540 433 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 MSI1O43347 362 aaKnown RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 SORBS2O94875 1100 aaKnown RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 PRSS1P07477 247 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 MYZAPP0CAP1 466 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 SLC5A1P13866 664 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 TPH1P17752 444 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 CDC25CP30307 473 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 TLX1P31314 330 aaPredicted RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 MLLT10P55197 1068 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 SLC37A1P57057 533 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 GNB1P62873 340 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 SEMA3BQ13214 749 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 PKP1Q13835 747 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 KCNAB1Q14722 419 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 UGP2Q16851 508 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 PLAG1Q6DJT9 500 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 AAGABQ6PD74 315 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 FAM198BQ6UWH4 519 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 LCTLQ6UWM7 567 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 Q6ZVH6 145 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 MON1BQ7L1V2 547 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 NFE4Q86UQ8 179 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 CLASRPQ8N2M8 674 aaKnown RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 CNBD1Q8NA66 436 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 HCAR2Q8TDS4 363 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 SMCR8Q8TEV9 937 aaPredicted RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 OVCA2Q8WZ82 227 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 TRIM43Q96BQ3 446 aaPredicted RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 SNX27Q96L92 541 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 OPRPNQ99935 248 aaPredicted RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 PRDM16Q9HAZ2 1276 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 LRFN1Q9P244 771 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 HPSEQ9Y251 543 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 TNFSF13BQ9Y275 285 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 CSAG2Q9Y5P2 127 aa0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 ZNF646O15015 1829 aaPredicted RBP0.93□□□□□ -2.26
MIR548A3-201ENST00000385297 RAB27BO00194 218 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms