RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.33
TTC39B-202ENST00000380850 XPO1O14980 1071 aaKnown RBP12.96□□□□□ -0.33
TTC39B-202ENST00000380850 POLBP06746 335 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 GSTA1P08263 222 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 ETV4P43268 484 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 CPT1AP50416 773 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 TUBP50607 506 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 NEK3P51956 506 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.33
TTC39B-202ENST00000380850 SLC20A2Q08357 652 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 CSHL1Q14406 222 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.33
TTC39B-202ENST00000380850 PSMD5Q16401 504 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 MGAT5BQ3V5L5 792 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 NAPRTQ6XQN6 538 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 ZNF276Q8N554 614 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 LRRC52Q8N7C0 313 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
TTC39B-202ENST00000380850 ARNTL2Q8WYA1 636 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 TRIB2Q92519 343 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 CASP10Q92851 521 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 GRAMD1AQ96CP6 724 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 NMUR1Q9HB89 426 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 GIMAP2Q9UG22 337 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 KIAA1257Q9ULG3 409 aa12.96□□□□□ -0.33
TTC39B-202ENST00000380850 RUVBL2Q9Y230 463 aaKnown RBP12.96□□□□□ -0.33
TTC39B-202ENST00000380850 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 SETSIPP0DME0 302 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 RALBP11234 206 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 ENO3P13929 434 aaPredicted RBP12.96□□□□□ -0.34
TTC39B-202ENST00000380850 MRPS6P82932 125 aaKnown RBP12.96□□□□□ -0.34
TTC39B-202ENST00000380850 CAP1Q01518 475 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 KCNA10Q16322 511 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 KCNMB4Q86W47 210 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 SPATA2LQ8IUW3 424 aaPredicted RBP12.96□□□□□ -0.34
TTC39B-202ENST00000380850 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 ESAMQ96AP7 390 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 ELMO2Q96JJ3 720 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 TRIM8Q9BZR9 551 aa12.96□□□□□ -0.34
TTC39B-202ENST00000380850 A0A1W2PQH9 124 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 NCF1BA6NI72 391 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 NCF1CA8MVU1 366 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 GSC2O15499 205 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 PAGE1O75459 146 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 CNTN5O94779 1100 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 JUNP05412 331 aaKnown RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 CPB1P15086 417 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 CD68P34810 354 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 SNX16P57768 344 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 TDRPQ86YL5 185 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 MLPHQ9BV36 600 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 GGA2Q9UJY4 613 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 TLK1Q9UKI8 766 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 ACTL7BQ9Y614 415 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 C2P06681 752 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 BPGMP07738 259 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 PTPN4P29074 926 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 MPP3Q13368 585 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 ZNF470Q6ECI4 717 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 MAPK15Q8TD08 544 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 BLOC1S5Q8TDH9 187 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 TMA16Q96EY4 203 aaKnown RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 FAM8A1Q9UBU6 413 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 APOBEC2Q9Y235 224 aaKnown RBP12.95□□□□□ -0.34
TTC39B-202ENST00000380850 LOXHD1Q8IVV2 1947 aa12.95□□□□□ -0.34
TTC39B-202ENST00000380850 TM9SF1O15321 606 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 CPA3P15088 417 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 CRYBB1P53674 252 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-202ENST00000380850 CDH13P55290 713 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 ATG16L1Q676U5 607 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 RAP1GAP2Q684P5 730 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SCIMPQ6UWF3 145 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 UNC93AQ86WB7 457 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 WDR75Q8IWA0 830 aaKnown RBP12.94□□□□□ -0.34
TTC39B-202ENST00000380850 CNTD1Q8N815 330 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SPDL1Q96EA4 605 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 OR52B2Q96RD2 323 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 HBS1LQ9Y450 684 aaKnown RBP12.94□□□□□ -0.34
TTC39B-202ENST00000380850 BPTFQ12830 3046 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 PSME4Q14997 1843 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SRRM3A6NNA2 597 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-202ENST00000380850 J3KR12 359 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SLC12A1Q13621 1099 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 ARL13BQ3SXY8 428 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 RIPOR1Q6ZS17 1223 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 SDCCAG8Q86SQ7 713 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-202ENST00000380850 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
TTC39B-202ENST00000380850 HPS6Q86YV9 775 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms