RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 GALNT2Q10471 571 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 MUM1Q2TAK8 710 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 NAPRTQ6XQN6 538 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 AGMOQ6ZNB7 445 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 TAC4Q86UU9 113 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 TMEM86AQ8N2M4 240 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 HASPINQ8TF76 798 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 UPF1Q92900 1129 aaKnown RBP eCLIP20.47■□□□□ 0.87
EBF1-202ENST00000380654 ANKRD27Q96NW4 1050 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 PANX3Q96QZ0 392 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 SHCBP1LQ9BZQ2 653 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 ACSS2Q9NR19 701 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 BATF3Q9NR55 127 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 APOBEC2Q9Y235 224 aaKnown RBP20.47■□□□□ 0.87
EBF1-202ENST00000380654 ARHGAP42A6NI28 874 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 ZNF195O14628 629 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 NCAM2O15394 837 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 CAPN15O75808 1086 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 TM7SF2O76062 418 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 SRGAP2BP0DMP2 458 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 BDNFP23560 247 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 ABCE1P61221 599 aaKnown RBP20.47■□□□□ 0.87
EBF1-202ENST00000380654 ARHGAP36Q6ZRI8 547 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 OTOP3Q7RTS5 596 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 ARHGAP24Q8N264 748 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 PPP4R1Q8TF05 950 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 SMARCD1Q96GM5 515 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 C20orf96Q9NUD7 363 aaPredicted RBP20.47■□□□□ 0.87
EBF1-202ENST00000380654 SLC7A8Q9UHI5 535 aa20.47■□□□□ 0.87
EBF1-202ENST00000380654 A0A096LPK6 155 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 NVLO15381 856 aaKnown RBP20.46■□□□□ 0.87
EBF1-202ENST00000380654 SIN3BO75182 1162 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 SKAP2O75563 359 aaPredicted RBP20.46■□□□□ 0.87
EBF1-202ENST00000380654 PDHA1P08559 390 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 AOC1P19801 751 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 NMBRP28336 390 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 CPOXP36551 454 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 VHLP40337 213 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 CXCR3P49682 368 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 SERPINB8P50452 374 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 SLC25A3Q00325 362 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 SLC34A1Q06495 639 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 USP4Q13107 963 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 PPP2R5DQ14738 602 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 RIPOR1Q6ZS17 1223 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 KCNMB4Q86W47 210 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 C2orf69Q8N8R5 385 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 ZSCAN18Q8TBC5 510 aaPredicted RBP20.46■□□□□ 0.87
EBF1-202ENST00000380654 ISL2Q96A47 359 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 ZNF333Q96JL9 665 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 EPAS1Q99814 870 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 IARS2Q9NSE4 1012 aaKnown RBP20.46■□□□□ 0.87
EBF1-202ENST00000380654 CDH9Q9ULB4 789 aa20.46■□□□□ 0.87
EBF1-202ENST00000380654 FAM163BP0C2L3 166 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 MX2P20592 715 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 GRK2P25098 689 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 ANO7Q6IWH7 933 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 LRRC74BQ6ZQY2 392 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 SLC25A41Q8N5S1 370 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 CNTD1Q8N815 330 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 RNF34Q969K3 372 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 TEKT5Q96M29 485 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 SIK2Q9H0K1 926 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 TMLHEQ9NVH6 421 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 RAD54BQ9Y620 910 aa20.45■□□□□ 0.87
EBF1-202ENST00000380654 CHRNA1P02708 482 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 BLMHQ13867 455 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 TBCCQ15814 346 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
EBF1-202ENST00000380654 TAF2Q6P1X5 1199 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 SPATA22Q8NHS9 363 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 AGR3Q8TD06 166 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 SCG3Q8WXD2 468 aaKnown RBP20.45■□□□□ 0.86
EBF1-202ENST00000380654 DPF3Q92784 378 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 ZNF419Q96HQ0 510 aaPredicted RBP20.45■□□□□ 0.86
EBF1-202ENST00000380654 TMEM209Q96SK2 561 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 CPSF2Q9P2I0 782 aaKnown RBP20.45■□□□□ 0.86
EBF1-202ENST00000380654 STX18Q9P2W9 335 aaKnown RBP20.45■□□□□ 0.86
EBF1-202ENST00000380654 PTCH2Q9Y6C5 1203 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 TTC3P53804 2025 aa20.45■□□□□ 0.86
EBF1-202ENST00000380654 G3V2L1 256 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 M0QZ92 97 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 UPP2O95045 317 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 C2P06681 752 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 BRCC3P46736 316 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 HARS2P49590 506 aaKnown RBP20.44■□□□□ 0.86
EBF1-202ENST00000380654 MPP3Q13368 585 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 UPP1Q16831 310 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 RWDD4Q6NW29 188 aaKnown RBP20.44■□□□□ 0.86
EBF1-202ENST00000380654 CXCL17Q6UXB2 119 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 ZNF781Q8N8C0 355 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 OR6Y1Q8NGX8 325 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 URGCPQ8TCY9 931 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 MICAL1Q8TDZ2 1067 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 SIKE1Q9BRV8 207 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 AGO3Q9H9G7 860 aaKnown RBP20.44■□□□□ 0.86
EBF1-202ENST00000380654 MAN1C1Q9NR34 630 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 ADAM28Q9UKQ2 775 aa20.44■□□□□ 0.86
EBF1-202ENST00000380654 TRPV2Q9Y5S1 764 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms