RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	WDR60	Q8WVS4	1066 aa		11.96	□□□□□ -0.49
LMO7-204	ENST00000377499	DDX50	Q9BQ39	737 aa	Known RBP	11.96	□□□□□ -0.49
LMO7-204	ENST00000377499	SELENOS	Q9BQE4	189 aa		11.96	□□□□□ -0.49
LMO7-204	ENST00000377499	CWH43	Q9H720	699 aa		11.96	□□□□□ -0.49
LMO7-204	ENST00000377499	WDR6	Q9NNW5	1121 aa	Known RBP	11.96	□□□□□ -0.49
LMO7-204	ENST00000377499	ANLN	Q9NQW6	1124 aa		11.96	□□□□□ -0.49
LMO7-204	ENST00000377499	CFAP69	A5D8W1	941 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	IRAK2	O43187	625 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	TLR5	O60602	858 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	EFCAB14	O75071	495 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	ENDOD1	O94919	500 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	IVD	P26440	423 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	SERPINB6	P35237	376 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	NR2C2	P49116	596 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	PSMD7	P51665	324 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	MRPS35	P82673	323 aa	Known RBP	11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	MORF4L2	Q15014	288 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC45A4	Q5BKX6	768 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	ANKRD22	Q5VYY1	191 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC9A4	Q6AI14	798 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	HTR3C	Q8WXA8	447 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	DPF3	Q92784	378 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC9A7	Q96T83	725 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	MKS1	Q9NXB0	559 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	MPP6	Q9NZW5	540 aa		11.96	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC38A8	A6NNN8	435 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	TNFRSF10B	O14763	440 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	NDC80	O14777	642 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	RASGRF2	O14827	1237 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	HAPLN1	P10915	354 aa	Predicted RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	CXCR3	P49682	368 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SKOR1	P84550	965 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	PLOD1	Q02809	727 aa	Predicted RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	GAD2	Q05329	585 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	FPGS	Q05932	587 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	PUS10	Q3MIT2	529 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	C1orf53	Q5VUE5	145 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	C6orf89	Q6UWU4	347 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	TP53INP2	Q8IXH6	220 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	GBP7	Q8N8V2	638 aa	Predicted RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	FBF1	Q8TES7	1133 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	NDEL1	Q9GZM8	345 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	CCSER2	Q9H7U1	834 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	IL23A	Q9NPF7	189 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	PIH1D1	Q9NWS0	290 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	OSER1	Q9NX31	292 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SMPD4	Q9NXE4	827 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SCOC	Q9UIL1	159 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SCML2	Q9UQR0	700 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	CEP290	O15078	2479 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	RIPK2	O43353	540 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	TLL1	O43897	1013 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SOD2	P04179	222 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	ZNF844	Q08AG5	666 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	PPIG	Q13427	754 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	2e-6	■■□□□ 13.1
LMO7-204	ENST00000377499	TAZ	Q16635	292 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	PPP1R21	Q6ZMI0	780 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SMYD1	Q8NB12	490 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	COLGALT1	Q8NBJ5	622 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	NT5C3B	Q969T7	300 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	ERLEC1	Q96DZ1	483 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	ENTPD7	Q9NQZ7	604 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	MAGEA11	P43364	429 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	EIF3B	P55884	814 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	ITK	Q08881	620 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	MRPL58	Q14197	206 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SMAD1	Q15797	465 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	MUM1	Q2TAK8	710 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	UBAP2	Q5T6F2	1119 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	CHSY1	Q86X52	802 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	PSTK	Q8IV42	348 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	EPS8L3	Q8TE67	593 aa	Known RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	KLHL29	Q96CT2	875 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	CFAP36	Q96G28	342 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	RPRD1A	Q96P16	312 aa	Predicted RBP	11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	MCOLN1	Q9GZU1	580 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	TRPM5	Q9NZQ8	1165 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC4A7	Q9Y6M7	1214 aa		11.95	□□□□□ -0.5
LMO7-204	ENST00000377499	TCRBV7S3A2	A0A539	114 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	TMEM221	A6NGB7	291 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499		A6NNZ2	444 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	RNF103	O00237	685 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	OXCT1	P55809	520 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	SMARCB1	Q12824	385 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	TUBB8	Q3ZCM7	444 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	RAP1GAP2	Q684P5	730 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ZCCHC9	Q8N567	271 aa	Known RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CPT1B	Q92523	772 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	NTAN1	Q96AB6	310 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ETNK1	Q9HBU6	452 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	MTRR	Q9UBK8	725 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	EXOC1L	A0A1B0GW35	172 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	MAGEA13P	A6NCF6	341 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	TMEM247	A6NEH6	219 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	LPXN	O60711	386 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CXCL14	O95715	111 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ZCCHC18	P0CG32	403 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms