RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 KDM4CQ9H3R0 1056 aa19.03■□□□□ 0.64
HDAC6-202ENST00000376610 EBF2Q9HAK2 575 aa19.03■□□□□ 0.64
HDAC6-202ENST00000376610 PCDHGC3Q9UN70 934 aa19.03■□□□□ 0.64
HDAC6-202ENST00000376610 GPSM3Q9Y4H4 160 aa19.03■□□□□ 0.64
HDAC6-202ENST00000376610 URB1O60287 2271 aaKnown RBP19.03■□□□□ 0.64
HDAC6-202ENST00000376610 BAHCC1Q9P281 2608 aa19.03■□□□□ 0.64
HDAC6-202ENST00000376610 GTPBP10A4D1E9 387 aaKnown RBP19.02■□□□□ 0.64
HDAC6-202ENST00000376610 BECN2A8MW95 431 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 C1QTNF3-AMACRE9PGA6 284 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 SLC7A4O43246 635 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 MAGEC1O60732 1142 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 GRAP2O75791 330 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 CDK4P11802 303 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 NUDT1P36639 197 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 MTIF2P46199 727 aaKnown RBP19.02■□□□□ 0.64
HDAC6-202ENST00000376610 EIF4EBP2Q13542 120 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-202ENST00000376610 AUHQ13825 339 aaKnown RBP19.02■□□□□ 0.64
HDAC6-202ENST00000376610 SMAD1Q15797 465 aaKnown RBP19.02■□□□□ 0.64
HDAC6-202ENST00000376610 PRAMEF14Q5SWL7 426 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 NAPEPLDQ6IQ20 393 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 C19orf48Q6RUI8 117 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 PDCD7Q8N8D1 485 aaKnown RBP19.02■□□□□ 0.64
HDAC6-202ENST00000376610 SHC3Q92529 594 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 KIAA1468Q9P260 1216 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 DKK4Q9UBT3 224 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 VPS28Q9UK41 221 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 VANGL2Q9ULK5 521 aa19.02■□□□□ 0.64
HDAC6-202ENST00000376610 ITPR1Q14643 2758 aa19.02■□□□□ 0.63
HDAC6-202ENST00000376610 COL5A1P20908 1838 aaPredicted RBP19.02■□□□□ 0.63
HDAC6-202ENST00000376610 TLR4O00206 839 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 ENC1O14682 589 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 CLDN11O75508 207 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 DAB1O75553 588 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 LDOC1O95751 146 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-202ENST00000376610 WNT1P04628 370 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 VAV1P15498 845 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 HNF1BP35680 557 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 VASPP50552 380 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-202ENST00000376610 CENPCQ03188 943 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 CXorf57Q6NSI4 855 aaKnown RBP19.01■□□□□ 0.63
HDAC6-202ENST00000376610 DHRS13Q6UX07 377 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 FAM183BPQ6ZVS7 135 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 C1orf131Q8NDD1 294 aaKnown RBP19.01■□□□□ 0.63
HDAC6-202ENST00000376610 FRS2Q8WU20 508 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 CNDP2Q96KP4 475 aaKnown RBP19.01■□□□□ 0.63
HDAC6-202ENST00000376610 FEM1AQ9BSK4 669 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 MUC3BQ9H195 1237 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 PDCL3Q9H2J4 239 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 RRN3Q9NYV6 651 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 RAXQ9Y2V3 346 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 FARP1Q9Y4F1 1045 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-202ENST00000376610 PAXBP1Q9Y5B6 917 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 PCDHGA1Q9Y5H4 931 aa19.01■□□□□ 0.63
HDAC6-202ENST00000376610 FASNP49327 2511 aaKnown RBP19■□□□□ 0.63
HDAC6-202ENST00000376610 A0A1W2PR77 199 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 FAM149AA5PLN7 773 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 TRABD2BA6NFA1 517 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 ALOX15BO15296 676 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 LATO43561 262 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 C1SP09871 688 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 EPHA8P29322 1005 aaPredicted RBP19■□□□□ 0.63
HDAC6-202ENST00000376610 NOS2P35228 1153 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 DRD3P35462 400 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 SLC6A3Q01959 620 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 CCDC15Q0P6D6 951 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 DLG2Q15700 870 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 TMPRSS12Q86WS5 348 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 ZDHHC17Q8IUH5 632 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 WDTC1Q8N5D0 677 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 MFSD2AQ8NA29 543 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 SAP25Q8TEE9 199 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 CCDC114Q96M63 670 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 STAP1Q9ULZ2 295 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 DMTF1Q9Y222 760 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 HS3ST4Q9Y661 456 aa19■□□□□ 0.63
HDAC6-202ENST00000376610 E9PAM4 449 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 M0QYT0 321 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 PLRG1O43660 514 aaKnown RBP18.99■□□□□ 0.63
HDAC6-202ENST00000376610 ATP9BO43861 1147 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 BNIP3LO60238 219 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 RTN2O75298 545 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 PAGE1O75459 146 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 RFPL3O75679 317 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 PON1P27169 355 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 MAT2AP31153 395 aaKnown RBP18.99■□□□□ 0.63
HDAC6-202ENST00000376610 CDH4P55283 916 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 NXPH1P58417 271 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 BPIFB4P59827 614 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 PPP2CBP62714 309 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 PPP2CAP67775 309 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 KRT83P78385 493 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 APBA1Q02410 837 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 CYP4F3Q08477 520 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 OVGP1Q12889 678 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 STAT4Q14765 748 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 CAMK4Q16566 473 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 COL28A1Q2UY09 1125 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 SETMARQ53H47 684 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-202ENST00000376610 OLFML1Q6UWY5 402 aa18.99■□□□□ 0.63
HDAC6-202ENST00000376610 SLC26A9Q7LBE3 791 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms