RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PLK1P53350 603 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 CDH4P55283 916 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 HDAC4P56524 1084 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 ST8SIA6P61647 398 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 ARID5BQ14865 1188 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 ZNF776Q68DI1 518 aaPredicted RBP16.03■□□□□ 0.16
SDHB-201ENST00000375499 SLC23A3Q6PIS1 610 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.166e-6■□□□□ 9.2
SDHB-201ENST00000375499 TFAP2DQ7Z6R9 452 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 KDM1BQ8NB78 822 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 FRS2Q8WU20 508 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 FEM1AQ9BSK4 669 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 RSPH9Q9H1X1 276 aaPredicted RBP16.03■□□□□ 0.16
SDHB-201ENST00000375499 C6orf106Q9H6K1 298 aaPredicted RBP16.03■□□□□ 0.16
SDHB-201ENST00000375499 CAPN10Q9HC96 672 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 SUN2Q9UH99 717 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 NEU3Q9UQ49 428 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 TBC1D30Q9Y2I9 924 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 MSRB2Q9Y3D2 182 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 FRYQ5TBA9 3013 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 ZFYVE26Q68DK2 2539 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 PLXNA2O75051 1894 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 A0A0D9SEW6 157 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 A0A1W2PQC6 194 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 DRGXA6NNA5 263 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 MID1O15344 667 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 CLDN11O75508 207 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 CFIP05156 583 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 ENGP17813 658 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 SDC4P31431 198 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 METAP1P53582 386 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 RPL7AP62424 266 aaKnown RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 MTA1Q13330 715 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 ZNF177Q13360 481 aaPredicted RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 NR1I3Q14994 352 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 DCAF12L1Q5VU92 463 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 RNF219Q5W0B1 726 aaPredicted RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 WDR59Q6PJI9 974 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 MMAAQ8IVH4 418 aaKnown RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 STK40Q8N2I9 435 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 CCDC185Q8N715 623 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 OR2I1PQ8NGU4 316 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 CENPIQ92674 756 aaPredicted RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 HAPLN3Q96S86 360 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 FAM129BQ96TA1 746 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 NUP58Q9BVL2 599 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 NUSAP1Q9BXS6 441 aaKnown RBP16.02■□□□□ 0.16
SDHB-201ENST00000375499 FBRSQ9HAH7 460 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 MYO6Q9UM54 1294 aa16.02■□□□□ 0.16
SDHB-201ENST00000375499 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FAM221BA6H8Z2 402 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 MEI4A8MW99 385 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FAM72CH0Y354 149 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 ATMINO43313 823 aaPredicted RBP16.01■□□□□ 0.15
SDHB-201ENST00000375499 SRGAP2O75044 1071 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 MT-CO1P00395 513 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 CALB1P05937 261 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 RHOCP08134 193 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 KRT3P12035 628 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 GLDCP23378 1020 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 RRM1P23921 792 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 OXTRP30559 389 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 HOXD12P35452 270 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 PBX1P40424 430 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 PTPN9P43378 593 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 MAPK8P45983 427 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FANCCQ00597 558 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 OGDHQ02218 1023 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
SDHB-201ENST00000375499 HNRNPDQ14103 355 aaKnown RBP16.01■□□□□ 0.15
SDHB-201ENST00000375499 CST6Q15828 149 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 DUOXA1Q1HG43 343 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FILIP1LQ4L180 1135 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 PPP1R15BQ5SWA1 713 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FAM72AQ5TYM5 149 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 MANEALQ5VSG8 457 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FAM72DQ6L9T8 149 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 ZNF571Q7Z3V5 609 aaPredicted RBP16.01■□□□□ 0.15
SDHB-201ENST00000375499 FAM72BQ86X60 149 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 RGL4Q8IZJ4 473 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 MCOLN2Q8IZK6 566 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 OR7D4Q8NG98 312 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 FAM172AQ8WUF8 416 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 DNASE2BQ8WZ79 361 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 C1orf74Q96LT6 269 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 SELENOOQ9BVL4 669 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 PABPC3Q9H361 631 aaKnown RBP16.01■□□□□ 0.15
SDHB-201ENST00000375499 NDFIP2Q9NV92 336 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 VPS28Q9UK41 221 aa16.01■□□□□ 0.15
SDHB-201ENST00000375499 TP53BP1Q12888 1972 aaPredicted RBP16■□□□□ 0.15
SDHB-201ENST00000375499 KNL1Q8NG31 2342 aa16■□□□□ 0.15
SDHB-201ENST00000375499 PKD1L2Q7Z442 2459 aa16■□□□□ 0.15
SDHB-201ENST00000375499 A0A1W2PP55 124 aa16■□□□□ 0.15
SDHB-201ENST00000375499 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
SDHB-201ENST00000375499 SIGLEC16A6NMB1 481 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms