RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TMEM151AQ8N4L1 468 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 SLC26A7Q8TE54 656 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 OSMRQ99650 979 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 RTKNQ9BST9 563 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 GOLGA2P5Q9HBQ8 144 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 COX16Q9P0S2 106 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 KLHL8Q9P2G9 620 aaPredicted RBP13.02□□□□□ -0.32
CTPS1-202ENST00000372621 STAP1Q9ULZ2 295 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 SHROOM3Q8TF72 1996 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.02□□□□□ -0.33
CTPS1-202ENST00000372621 CLDN5O00501 218 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 ZNF189O75820 626 aaPredicted RBP13.02□□□□□ -0.33
CTPS1-202ENST00000372621 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.33
CTPS1-202ENST00000372621 ZCCHC18P0CG32 403 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.33
CTPS1-202ENST00000372621 ADRA1BP35368 520 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 SCAPQ12770 1279 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 KLF10Q13118 480 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 FSCBQ5H9T9 825 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 LPCAT4Q643R3 524 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 NTAN1Q96AB6 310 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 AGAP3Q96P47 875 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 MLPHQ9BV36 600 aaPredicted RBP13.02□□□□□ -0.33
CTPS1-202ENST00000372621 CAB39LQ9H9S4 337 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 CYP4F11Q9HBI6 524 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 WDR6Q9NNW5 1121 aaKnown RBP13.02□□□□□ -0.33
CTPS1-202ENST00000372621 MAN1C1Q9NR34 630 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 NUP205Q92621 2012 aa13.02□□□□□ -0.33
CTPS1-202ENST00000372621 AIF1P55008 147 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 TBL3Q12788 808 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 NME3Q13232 169 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CUL3Q13618 768 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CWF19L1Q69YN2 538 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CLEC20AQ6ZU45 233 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ZNF467Q7Z7K2 595 aaPredicted RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 KLHL4Q9C0H6 718 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 OXSMQ9NWU1 459 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 BFARQ9NZS9 450 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 KLK14Q9P0G3 267 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 E9PBE3 544 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 KLHL41O60662 606 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 TRIM13O60858 407 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 LTFP02788 710 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 C2P06681 752 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CD1EP15812 388 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ACAT1P24752 427 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 LILRA4P59901 499 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CDC42EP1Q00587 391 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ITGA7Q13683 1181 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 SV2CQ496J9 727 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 TOP6BLQ8N6T0 577 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 NPWQ8N729 165 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 DPF3Q92784 378 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CNDP1Q96KN2 507 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 OR52B2Q96RD2 323 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 NMRAL1Q9HBL8 299 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 ERI2A8K979 691 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 H2AFYO75367 372 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 HSPA4LO95757 839 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 SBK3P0C264 359 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 PEX2P28328 305 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 GJA5P36382 358 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 HCAR3P49019 387 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 DUSP28Q4G0W2 176 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 TCHHL1Q5QJ38 904 aaPredicted RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CERCAMQ5T4B2 595 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 GDPD5Q8WTR4 605 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 CCDC124Q96CT7 223 aaKnown RBP13.01□□□□□ -0.33
CTPS1-202ENST00000372621 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 SH3GL3Q99963 347 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 GBA3Q9H227 469 aa13.01□□□□□ -0.33
CTPS1-202ENST00000372621 MAGEB16A2A368 324 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 MATN2O00339 956 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 NRP1O14786 923 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 NCAM2O15394 837 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 HUS1O60921 280 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 UQCRBP14927 111 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 CSE1LP55060 971 aaKnown RBP13□□□□□ -0.33
CTPS1-202ENST00000372621 AQP4P55087 323 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 SATB1Q01826 763 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 ZBTB17Q13105 803 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 GRM2Q14416 872 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 DGKDQ16760 1214 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 UBXN11Q5T124 520 aa13□□□□□ -0.33
CTPS1-202ENST00000372621 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms