RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 STAMBPL1Q96FJ0 436 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 GORASP1Q9BQQ3 440 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 FETUBQ9UGM5 382 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 SSX2IPQ9Y2D8 614 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 SDR42E2A6NKP2 422 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 ACSL4O60488 711 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 USP12O75317 370 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 IRF1P10914 325 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 BRAFP15056 766 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 SLC11A2P49281 568 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 CRADDP78560 199 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 OLIG2Q13516 323 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 KBTBD12Q3ZCT8 623 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 TMEM240Q5SV17 173 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 PSRC1Q6PGN9 363 aaPredicted RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 UNC5AQ6ZN44 842 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 TMC7Q7Z402 723 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 OR52K1Q8NGK4 314 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 DPF3Q92784 378 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 HMCESQ96FZ2 354 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 MLPHQ9BV36 600 aaPredicted RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 MCOLN1Q9GZU1 580 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 NOL6Q9H6R4 1146 aaKnown RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 UBP1Q9NZI7 540 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 UXTQ9UBK9 157 aaPredicted RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 IPO11Q9UI26 975 aaKnown RBP15.31■□□□□ 0.04
NEK2-201ENST00000366998 OBSL1O75147 1896 aa15.31■□□□□ 0.04
NEK2-201ENST00000366998 C2orf78A6NCI8 922 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 DRGXA6NNA5 263 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 LILRB3O75022 631 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 CXCL14O95715 111 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 GSTA2P09210 222 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 CNPP09543 421 aaKnown RBP15.3■□□□□ 0.04
NEK2-201ENST00000366998 ANO4Q32M45 955 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 KLHDC10Q6PID8 442 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 OTOP3Q7RTS5 596 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 PRPF39Q86UA1 669 aaKnown RBP15.3■□□□□ 0.04
NEK2-201ENST00000366998 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 GPR65Q8IYL9 337 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 CNTD1Q8N815 330 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 DNAAF3Q8N9W5 541 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 GSDMBQ8TAX9 411 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 ZSCAN18Q8TBC5 510 aaPredicted RBP15.3■□□□□ 0.04
NEK2-201ENST00000366998 PSMG2Q969U7 264 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 PLD4Q96BZ4 506 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 IL12RB2Q99665 862 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 TRPC7Q9HCX4 862 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 PPANQ9NQ55 473 aaKnown RBP15.3■□□□□ 0.04
NEK2-201ENST00000366998 INTS9Q9NV88 658 aaKnown RBP15.3■□□□□ 0.04
NEK2-201ENST00000366998 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
NEK2-201ENST00000366998 TMEM120BA0PK00 339 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 ERI2A8K979 691 aaKnown RBP15.29■□□□□ 0.04
NEK2-201ENST00000366998 INHBAP08476 426 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 LINC00271P0C7V0 271 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 PPP3CCP48454 512 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 DMTNQ08495 405 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 RASA2Q15283 850 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 ADGRD1Q6QNK2 874 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 ITIH5Q86UX2 942 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 TRABD2AQ86V40 505 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 DENND1CQ8IV53 801 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 HERC6Q8IVU3 1022 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 MGARPQ8TDB4 240 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 DCAKDQ8WVC6 231 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 CLP1Q92989 425 aaKnown RBP15.29■□□□□ 0.04
NEK2-201ENST00000366998 MYEOVQ96EZ4 313 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 DHRS4Q9BTZ2 278 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 SP110Q9HB58 689 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
NEK2-201ENST00000366998 GKN1Q9NS71 199 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 RBM22Q9NW64 420 aaKnown RBP eCLIP15.29■□□□□ 0.04
NEK2-201ENST00000366998 SYBUQ9NX95 663 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 MAFFQ9ULX9 164 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 ACTL7BQ9Y614 415 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 SLC4A7Q9Y6M7 1214 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
NEK2-201ENST00000366998 TGM5O43548 720 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 TLL1O43897 1013 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 RAMP2O60895 175 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 SUN1O94901 812 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 SYN1P17600 705 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 OR1E1P30953 314 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 CORO1AP31146 461 aaKnown RBP15.29■□□□□ 0.04
NEK2-201ENST00000366998 SLC6A4P31645 630 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 CTNNB1P35222 781 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 GLIPR1L2Q4G1C9 344 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 KCTD11Q693B1 232 aa15.29■□□□□ 0.04
NEK2-201ENST00000366998 CFAP52Q8N1V2 620 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms