RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 FASTKD1Q53R41 847 aaKnown RBP16.04■□□□□ 0.16
RTN3-205ENST00000356000 NEK5Q6P3R8 708 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 MFSD4AQ8N468 514 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 ZSWIM2Q8NEG5 633 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 IL12RB2Q99665 862 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 PNPOQ9NVS9 261 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 DLGAP1O14490 977 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 MARCH6O60337 910 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 DEAF1O75398 565 aaPredicted RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 GSRP00390 522 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 NTRK1P04629 796 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 CYP2D6P10635 497 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 GJC1P36383 396 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 NUDT1P36639 197 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 NFIXQ14938 502 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 VWA5B1Q5TIE3 1220 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 IGDCC3Q8IVU1 814 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 RNF148Q8N7C7 305 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 FIG4Q92562 907 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 KAT5Q92993 513 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 USP13Q92995 863 aaPredicted RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 NKD2Q969F2 451 aaPredicted RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 DMAC2Q9NW81 257 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 ABI2Q9NYB9 513 aaPredicted RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 SOCS2O14508 198 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 IFNB1P01574 187 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 FGF3P11487 239 aaPredicted RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 DPP6P42658 865 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 QARSP47897 775 aaKnown RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 NUMBP49757 651 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 FCHO2Q0JRZ9 810 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 BFSP2Q13515 415 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 CDK10Q15131 360 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 DUSP7Q16829 419 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 PLA2G4FQ68DD2 849 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 SLC9A4Q6AI14 798 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 HMBOX1Q6NT76 420 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 POTEGQ6S5H5 508 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 CHSY3Q70JA7 882 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 POLNQ7Z5Q5 900 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 ANKFN1Q8N957 763 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 PNPT1Q8TCS8 783 aaKnown RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 SNX19Q92543 992 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 DCP1AQ9NPI6 582 aaPredicted RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 UGT2A1Q9Y4X1 527 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 SNX13Q9Y5W8 968 aa16.03■□□□□ 0.16
RTN3-205ENST00000356000 ZNFX1Q9P2E3 1918 aaKnown RBP16.03■□□□□ 0.16
RTN3-205ENST00000356000 RGSL1A5PLK6 1076 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 EIF3DO15371 548 aaKnown RBP eCLIP16.02■□□□□ 0.16
RTN3-205ENST00000356000 SEC24DO94855 1032 aaPredicted RBP16.02■□□□□ 0.16
RTN3-205ENST00000356000 C1QAP02745 245 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 NLRP11P59045 1033 aaKnown RBP16.02■□□□□ 0.16
RTN3-205ENST00000356000 RACK1P63244 317 aaKnown RBP16.02■□□□□ 0.16
RTN3-205ENST00000356000 BFSP1Q12934 665 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 TRIM32Q13049 653 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 POU6F1Q14863 301 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.16
RTN3-205ENST00000356000 GTF2IRD2BQ6EKJ0 949 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 UNC5AQ6ZN44 842 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 GTF2IRD2Q86UP8 949 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 CMASQ8NFW8 434 aaPredicted RBP16.02■□□□□ 0.16
RTN3-205ENST00000356000 ZFP90Q8TF47 636 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 SORT1Q99523 831 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 POLE4Q9NR33 117 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 GMIPQ9P107 970 aa16.02■□□□□ 0.16
RTN3-205ENST00000356000 SRP68Q9UHB9 627 aaKnown RBP16.02■□□□□ 0.16
RTN3-205ENST00000356000 SGK1O00141 431 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 CFLARO15519 480 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 NADKO95544 446 aaPredicted RBP16.02■□□□□ 0.15
RTN3-205ENST00000356000 KRT8P05787 483 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 P4HBP07237 508 aaKnown RBP16.02■□□□□ 0.15
RTN3-205ENST00000356000 CYP11B1P15538 503 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 CD1EP15812 388 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 PIK3R1P27986 724 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 ELK3P41970 407 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 PTPN9P43378 593 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 RHDQ02161 417 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 SBK1Q52WX2 424 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 SNAP47Q5SQN1 464 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 LGSNQ5TDP6 509 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 RSBN1Q5VWQ0 802 aaPredicted RBP16.02■□□□□ 0.15
RTN3-205ENST00000356000 SNX32Q86XE0 403 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 LACC1Q8IV20 430 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 DEPDC4Q8N2C3 294 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 PACRGLQ8N7B6 248 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 ZSCAN18Q8TBC5 510 aaPredicted RBP16.02■□□□□ 0.15
RTN3-205ENST00000356000 ADI1Q9BV57 179 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 YTHDF1Q9BYJ9 559 aaKnown RBP16.02■□□□□ 0.15
RTN3-205ENST00000356000 ADAMTS10Q9H324 1103 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 PNPLA8Q9NP80 782 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 MTRRQ9UBK8 725 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 TANC1Q9C0D5 1861 aa16.02■□□□□ 0.15
RTN3-205ENST00000356000 GOLGA8IPA6NC78 632 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 hCG_2039718K7EN88 272 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms