RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 PARP6Q2NL67 630 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 TEX44Q53QW1 395 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 CMTM8Q8IZV2 173 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 PPP2R3CQ969Q6 453 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 EXOC4Q96A65 974 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 MRPL38Q96DV4 380 aaKnown RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 HMCESQ96FZ2 354 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 SEMA4AQ9H3S1 761 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 IPO11Q9UI26 975 aaKnown RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF510Q9Y2H8 683 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 SOBPA7XYQ1 873 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 E7EVH7 732 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 LEFTY2O00292 366 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF197O14709 1029 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 MATN3O15232 486 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 CLDN11O75508 207 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 JCHAINP01591 159 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 MAGEA6P43360 314 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 SGSHP51688 502 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 GAD2Q05329 585 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 POLD3Q15054 466 aaPredicted RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 PARP15Q460N3 678 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 PRSS36Q5K4E3 855 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 SYCP2LQ5T4T6 812 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 PPP1R21Q6ZMI0 780 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 HTR3DQ70Z44 454 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 CENPUQ71F23 418 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 TRMT10CQ7L0Y3 403 aaKnown RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 CHST9Q7L1S5 443 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF354CQ86Y25 554 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 C12orf76Q8N812 135 aaPredicted RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 SMG7Q92540 1137 aaKnown RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 ZIM3Q96PE6 472 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 SMG9Q9H0W8 520 aaKnown RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 PABPC3Q9H361 631 aaKnown RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 CDC42EP4Q9H3Q1 356 aaKnown RBP13.94□□□□□ -0.18
HOXA1-202ENST00000355633 IGSF9Q9P2J2 1179 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 CHD9Q3L8U1 2897 aa13.94□□□□□ -0.18
HOXA1-202ENST00000355633 A0A1B0GVM2 712 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 TCAF2A6NFQ2 919 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 F5H423 210 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 CCNB1P14635 433 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 PSMB4P28070 264 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ARL4CP56559 192 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 FAM193AP78312 1265 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 IFI35P80217 286 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 KCNC3Q14003 757 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ANO4Q32M45 955 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ITPRIPL1Q6GPH6 555 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 RELL1Q8IUW5 271 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 FAM217AQ8IXS0 508 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 IQCKQ8N0W5 287 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 VN1R2Q8NFZ6 395 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ZBTB9Q96C00 473 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 AGAP3Q96P47 875 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 RUFY1Q96T51 708 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 PHACTR1Q9C0D0 580 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 SFXN1Q9H9B4 322 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 SP110Q9HB58 689 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 SAYSD1Q9NPB0 183 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 RSPH14Q9UHP6 348 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 PLAAQ9Y263 795 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 MYO18AQ92614 2054 aaKnown RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 TYW5A2RUC4 315 aaKnown RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 TPSB2P20231 275 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 LMAN1P49257 510 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 GPS2Q13227 327 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF177Q13360 481 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 TPSAB1Q15661 275 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 C6orf118Q5T5N4 469 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 TMC5Q6UXY8 1006 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 HJURPQ8NCD3 748 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 TEKT5Q96M29 485 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 FRMD8Q9BZ67 464 aaPredicted RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 GBA3Q9H227 469 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 EPB41L4BQ9H329 900 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 IGFLR1Q9H665 355 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
HOXA1-202ENST00000355633 MRPS23Q9Y3D9 190 aaKnown RBP13.93□□□□□ -0.18
HOXA1-202ENST00000355633 RIPK2O43353 540 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 TBL1XO60907 577 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 RHOCP08134 193 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 ACVRL1P37023 503 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 MAGEA4P43358 317 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 PDIA2Q13087 525 aaKnown RBP13.92□□□□□ -0.18
HOXA1-202ENST00000355633 SERINC3Q13530 473 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 FNBP1LQ5T0N5 605 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 DENND2CQ68D51 928 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 BBS7Q8IWZ6 715 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 CPXM2Q8N436 756 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 MCUQ8NE86 351 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 ING5Q8WYH8 240 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms