RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CCDC106Q9BWC9 280 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 TMEM216Q9P0N5 145 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 DNAJC16Q9Y2G8 782 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 SPECC1L-ADORA2AF8WAN1 911 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 BDNFP23560 247 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 CDH17Q12864 832 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 TAC4Q86UU9 113 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 C10orf107Q8IVU9 208 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 TTC8Q8TAM2 541 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 MYCBPQ99417 103 aaPredicted RBP22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 PAAF1Q9BRP4 392 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 NSMCE4AQ9NXX6 385 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 SOX13Q9UN79 622 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 LRRC42Q9Y546 428 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 PGM1P36871 562 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 OLIG2Q13516 323 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 PPM1JQ5JR12 505 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 FSTL4Q6MZW2 842 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 TREML1Q86YW5 311 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 THEM5Q8N1Q8 247 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 DQX1Q8TE96 717 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 SREK1Q8WXA9 508 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 TRIB2Q92519 343 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 DPF3Q92784 378 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 AGO3Q9H9G7 860 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 APOBEC2Q9Y235 224 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 AAR2Q9Y312 384 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 M0QZQ0 153 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 ITM2AO43736 263 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 KLHL2O95198 593 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 JCHAINP01591 159 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 PRKCGP05129 697 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 ENO1P06733 434 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 RALBP11234 206 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 MYL4P12829 197 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 CPA3P15088 417 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 CCNCP24863 283 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 RAP1GDS1P52306 607 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 DNAL1Q4LDG9 190 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 BRMS1LQ5PSV4 323 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 RFWD3Q6PCD5 774 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 CTU1Q7Z7A3 348 aaKnown RBP22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 KLHDC8BQ8IXV7 354 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 UROC1Q96N76 676 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 HAPLN3Q96S86 360 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 C1orf21Q9H246 121 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 BATF3Q9NR55 127 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 IL1RAPL1Q9NZN1 696 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 PADI3Q9ULW8 664 aa22.72■■□□□ 1.23
NKX2-1-201ENST00000354822 ATP9BO43861 1147 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 CACNG3O60359 315 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 IGLV3-25P01717 112 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 SRGAP2BP0DMP2 458 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 KHDC1Q4VXA5 237 aaKnown RBP22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 CERCAMQ5T4B2 595 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 KCNMB4Q86W47 210 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 LZTR1Q8N653 840 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 MAB21L3Q8N8X9 362 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 ZSCAN18Q8TBC5 510 aaPredicted RBP22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 RHOBTB2Q9BYZ6 727 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 ARHGEF38Q9NXL2 777 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 STOML1Q9UBI4 398 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 GABRQQ9UN88 632 aa22.71■■□□□ 1.23
NKX2-1-201ENST00000354822 A0A0U1RQF3 1178 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 PGK1P00558 417 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 AOC1P19801 751 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 GCKP35557 465 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 HARS2P49590 506 aaKnown RBP22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 ALDH18A1P54886 795 aaKnown RBP22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 ABCE1P61221 599 aaKnown RBP22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 NKX3-2P78367 333 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 GRIK3Q13003 919 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 EIF4EBP2Q13542 120 aaPredicted RBP22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 HSP90AA5PQ58FG0 334 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 MFSD3Q96ES6 412 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 PPP1R2P1Q96PQ5 205 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 PKMYT1Q99640 499 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 ABCC13Q9NSE7 274 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 C20orf96Q9NUD7 363 aaPredicted RBP22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 DNAJC28Q9NX36 388 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 SNX10Q9Y5X0 201 aa22.7■■□□□ 1.23
NKX2-1-201ENST00000354822 SKIP12755 728 aa22.7■■□□□ 1.22
NKX2-1-201ENST00000354822 MPP3Q13368 585 aa22.7■■□□□ 1.22
NKX2-1-201ENST00000354822 AGAP2Q99490 1192 aa22.7■■□□□ 1.22
NKX2-1-201ENST00000354822 ARHGAP39Q9C0H5 1083 aa22.7■■□□□ 1.22
NKX2-1-201ENST00000354822 COL4A4P53420 1690 aaPredicted RBP22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 POMCP01189 267 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 TSPY1Q01534 308 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 TUSC3Q13454 348 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 OR6Y1Q8NGX8 325 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 URGCPQ8TCY9 931 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 ZNF570Q96NI8 536 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 EBF4Q9BQW3 602 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 KIFC1Q9BW19 673 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 CHRAC1Q9NRG0 131 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 MID2Q9UJV3 735 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 A0A096LPK6 155 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 FGF10O15520 208 aaPredicted RBP22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 H2AFYO75367 372 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms