RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TIMM13Q9Y5L4 95 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 ZNF638Q14966 1978 aaKnown RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 XPO1O14980 1071 aaKnown RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 PHGDHO43175 533 aaKnown RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 ATP5BP06576 529 aaKnown RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 CHRM1P11229 460 aaPredicted RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 ADRA1BP35368 520 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 AVPR1AP37288 418 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 LIMK2P53671 638 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 TRIP10Q15642 601 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 WSCD1Q658N2 575 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 TMEM198Q66K66 360 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 TMEM135Q86UB9 458 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 RNF148Q8N7C7 305 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 TDRD5Q8NAT2 981 aaKnown RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 URGCPQ8TCY9 931 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 NT5C3BQ969T7 300 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 SIKE1Q9BRV8 207 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 DUSP16Q9BY84 665 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 LRRC40Q9H9A6 602 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 C20orf96Q9NUD7 363 aaPredicted RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 TMEM30AQ9NV96 361 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 DERAQ9Y315 318 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 NMBRP28336 390 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 NOS2P35228 1153 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 SPRP35270 261 aaPredicted RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 TKTL1P51854 596 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 LILRA4P59901 499 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 PAFAH1B3Q15102 231 aaKnown RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 SPANXN3Q5MJ09 141 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 NOTUMQ6P988 496 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 AAGABQ6PD74 315 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 GPRIN1Q7Z2K8 1008 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 ZNF410Q86VK4 478 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 FBXW8Q8N3Y1 598 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 MARK4Q96L34 752 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 STN1Q9H668 368 aaKnown RBP18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 LRRC4Q9HBW1 653 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 DNAJB4Q9UDY4 337 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 SSX2IPQ9Y2D8 614 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 NUP205Q92621 2012 aa18.47■□□□□ 0.55
PTP4A3-202ENST00000349124 H3BNX3 289 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 JUNP05412 331 aaKnown RBP18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 MMP3P08254 477 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 GARSP41250 739 aaKnown RBP18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 BTKQ06187 659 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 DBN1Q16643 649 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 GSTA3Q16772 222 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 DNAJB3Q8WWF6 145 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 WNT8BQ93098 351 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 PPP2R3CQ969Q6 453 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 CELF6Q96J87 481 aaKnown RBP18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 NAT9Q9BTE0 207 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 ULBP1Q9BZM6 244 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 NMRAL1Q9HBL8 299 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 BFARQ9NZS9 450 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 HUS1O60921 280 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 AP2A1O95782 977 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 FAM219BQ5XKK7 198 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 CLEC20AQ6ZU45 233 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 USP33Q8TEY7 942 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 EDEM1Q92611 657 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 LENG1Q96BZ8 264 aaPredicted RBP18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 CDCA5Q96FF9 252 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 ZFP42Q96MM3 310 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 MED10Q9BTT4 135 aa18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 RCOR3Q9P2K3 495 aaPredicted RBP18.46■□□□□ 0.55
PTP4A3-202ENST00000349124 DAB1O75553 588 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 NFKB1P19838 968 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 SCNN1AP37088 669 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 MAGEA12P43365 314 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 TAF6P49848 677 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 SERPINB8P50452 374 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 ZNF460Q14592 562 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 GRM3Q14832 879 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 CCDC153Q494R4 210 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 OTOP3Q7RTS5 596 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 GALNT15Q8N3T1 639 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 APBA2Q99767 749 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 NUF2Q9BZD4 464 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 MEIS3P2A8K0S8 358 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 TXNDC9O14530 226 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 TRIM13O60858 407 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 SBK3P0C264 359 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 NPR3P17342 541 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 PTPN1P18031 435 aaKnown RBP18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 VCLP18206 1134 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 GRIA2P42262 883 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 AFF1P51825 1210 aaKnown RBP18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 MPP3Q13368 585 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 KCNMB4Q86W47 210 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 SIX6OS1Q8N1H7 587 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 TMEM151AQ8N4L1 468 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 OR6J1Q8NGC5 347 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 HNRNPABQ99729 332 aaKnown RBP18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 WDR6Q9NNW5 1121 aaKnown RBP18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 GDAP2Q9NXN4 497 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 PDP2Q9P2J9 529 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 PCDHGB4Q9UN71 923 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms