RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 RIPK2O43353 540 aa13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 LZTS3O60299 673 aaPredicted RBP13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 ASMTLO95671 621 aa13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 MDH1P40925 334 aaKnown RBP13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 IRX4P78413 519 aa13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 RTL3Q8N8U3 475 aaKnown RBP13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 SPATA17Q96L03 361 aa13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 TRMT6Q9UJA5 497 aaKnown RBP13.96□□□□□ -0.18
CSNK1G3-201ENST00000345990 TRIM49D1C9J1S8 452 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 RHOBTB1O94844 696 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZNF33AQ06730 810 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 CPNE1Q99829 537 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 LOXHD1Q8IVV2 1947 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 WDR91A4D1P6 747 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 H3BMM5 538 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 FGF1P05230 155 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 IGFBP4P22692 258 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ELK3P41970 407 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZBTB6Q15916 424 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 DNAJB7Q7Z6W7 309 aaPredicted RBP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 PTCD2Q8WV60 388 aaKnown RBP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZBTB18Q99592 522 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 BBS2Q9BXC9 721 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 CLPBQ9H078 707 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 FGFR1OP2Q9NVK5 253 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ARIH1Q9Y4X5 557 aaPredicted RBP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 MPOP05164 745 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 HNRNPA1P09651 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 HTRA3P83110 453 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 RFTN1Q14699 578 aaPredicted RBP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 MAB21L3Q8N8X9 362 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 R3HDMLQ9H3Y0 253 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 MYL2P10916 166 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 STMN1P16949 149 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 PFKLP17858 780 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 PRKAA2P54646 552 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 SOX4Q06945 474 aaPredicted RBP13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 TEX44Q53QW1 395 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 LPCAT1Q8NF37 534 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 PAFAH2Q99487 392 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 ETNK1Q9HBU6 452 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 MTRRQ9UBK8 725 aa13.95□□□□□ -0.18
CSNK1G3-201ENST00000345990 C1QTNF3-AMACRE9PGA6 284 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 RBP1P09455 135 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 GFAPP14136 432 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 VCLP18206 1134 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 MMEL1Q495T6 779 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 SMOQ99835 787 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 SOAT2O75908 522 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 CD151P48509 253 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 PEX5P50542 639 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 DSC3Q14574 896 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 TBCCQ15814 346 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 FAM46CQ5VWP2 391 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 CCNYL1Q8N7R7 359 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 WFIKKN2Q8TEU8 576 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 ACTR5Q9H9F9 607 aaPredicted RBP13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 NCKAP1Q9Y2A7 1128 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 TMCC1O94876 653 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 P2RY11Q96G91 374 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 WWP1Q9H0M0 922 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 TASP1Q9H6P5 420 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 CCDC22O60826 627 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 LRIG2O94898 1065 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 ADRA1DP25100 572 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 ITGA9Q13797 1035 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 LBRQ14739 615 aaKnown RBP13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZDHHC20Q5W0Z9 365 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 EXT2Q93063 718 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 PGM2Q96G03 612 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 NPY6RQ99463 290 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 GLOD4Q9HC38 313 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 SLC39A10Q9ULF5 831 aa13.94□□□□□ -0.18
CSNK1G3-201ENST00000345990 TM9SF1O15321 606 aa13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 GCATO75600 419 aa13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 SRP72O76094 671 aaKnown RBP13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 ZNF7P17097 686 aaPredicted RBP13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 CRABP2P29373 138 aa13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 IL10RBQ08334 325 aa13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 STX3Q13277 289 aa13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 HNRNPDQ14103 355 aaKnown RBP13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
CSNK1G3-201ENST00000345990 LYPLAL1Q5VWZ2 237 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms