RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 HAS1Q92839 578 aa17.28■□□□□ 0.36
CDK11B-201ENST00000340677 CDCA5Q96FF9 252 aa17.28■□□□□ 0.36
CDK11B-201ENST00000340677 RMND5BQ96G75 393 aaPredicted RBP17.28■□□□□ 0.36
CDK11B-201ENST00000340677 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
CDK11B-201ENST00000340677 CDADC1Q9BWV3 514 aa17.28■□□□□ 0.36
CDK11B-201ENST00000340677 FRMD8Q9BZ67 464 aaPredicted RBP17.28■□□□□ 0.36
CDK11B-201ENST00000340677 LHX5Q9H2C1 402 aa17.28■□□□□ 0.36
CDK11B-201ENST00000340677 LRRC53A6NM62 1247 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 A8MXQ7 604 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 GSC2O15499 205 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 SNX4O95219 450 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 RPA1P27694 616 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 DSG3P32926 999 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 GJC1P36383 396 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 GPLD1P80108 840 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 TKFCQ3LXA3 575 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 CACHD1Q5VU97 1274 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 C1orf146Q5VVC0 180 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 CATSPERGQ6ZRH7 1159 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 SLC22A9Q8IVM8 553 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 CADM2Q8N3J6 435 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 OR8H1Q8NGG4 311 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 AKAP1Q92667 903 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDK11B-201ENST00000340677 THAP11Q96EK4 314 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 MS4A14Q96JA4 679 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 TMEM68Q96MH6 324 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 HS6ST2Q96MM7 605 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 ZPBPQ9BS86 351 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 ZNF696Q9H7X3 374 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 MAT2BQ9NZL9 334 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 RAD51CO43502 376 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 MICAL2O94851 1124 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 PGK2P07205 417 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 ACTN1P12814 892 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 CDH1P12830 882 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 TTKP33981 857 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 EEF1A1P68104 462 aaKnown RBP17.27■□□□□ 0.36
CDK11B-201ENST00000340677 EEF1A2Q05639 463 aaKnown RBP17.27■□□□□ 0.36
CDK11B-201ENST00000340677 PPATQ06203 517 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 ATF7IP2Q5U623 682 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 EEF1A1P5Q5VTE0 462 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 REPS2Q8NFH8 660 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 VANGL1Q8TAA9 524 aaPredicted RBP17.27■□□□□ 0.36
CDK11B-201ENST00000340677 CLEC4DQ8WXI8 215 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 CALML4Q96GE6 196 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 TDRD1Q9BXT4 1180 aaKnown RBP17.27■□□□□ 0.36
CDK11B-201ENST00000340677 ZC4H2Q9NQZ6 224 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
CDK11B-201ENST00000340677 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDK11B-201ENST00000340677 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.35
CDK11B-201ENST00000340677 RPTORQ8N122 1335 aa17.27■□□□□ 0.35
CDK11B-201ENST00000340677 HOXA7P31268 230 aaPredicted RBP17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TECP42680 631 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 HADHBP55084 474 aaKnown RBP17.26■□□□□ 0.35
CDK11B-201ENST00000340677 DUSP4Q13115 394 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 NCOA4Q13772 614 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 LRRC36Q1X8D7 754 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 NLRX1Q86UT6 975 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 EID3Q8N140 333 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 ETNPPLQ8TBG4 499 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 RAB3IL1Q8TBN0 382 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 ST8SIA2Q92186 375 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TMIGD2Q96BF3 282 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 GON7Q9BXV9 100 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 GMPPBQ9Y5P6 360 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 LOXHD1Q8IVV2 1947 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 MYOCOSA0A1B0GUC4 107 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 CXCL11O14625 94 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 ZBTB39O15060 712 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 ZBTB14O43829 449 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 USP12O75317 370 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 VNN1O95497 513 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 CLEC2LP0C7M8 214 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 MYBP10242 640 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TMEM11P17152 192 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 VAMP1P23763 118 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TALDO1P37837 337 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 HMGCS2P54868 508 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 STX12Q86Y82 276 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 KLHL7Q8IXQ5 586 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TBC1D21Q8IYX1 336 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 OR8H2Q8N162 312 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 MARVELD2Q8N4S9 558 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TRUB1Q8WWH5 349 aaKnown RBP17.26■□□□□ 0.35
CDK11B-201ENST00000340677 LENG9Q96B70 501 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TBATAQ96M53 351 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 POLE3Q9NRF9 147 aa17.26■□□□□ 0.35
CDK11B-201ENST00000340677 TSPAN4O14817 238 aa17.25■□□□□ 0.35
CDK11B-201ENST00000340677 TM9SF1O15321 606 aa17.25■□□□□ 0.35
CDK11B-201ENST00000340677 PLEKP08567 350 aaPredicted RBP17.25■□□□□ 0.35
CDK11B-201ENST00000340677 PM20D1Q6GTS8 502 aa17.25■□□□□ 0.35
CDK11B-201ENST00000340677 TTI2Q6NXR4 508 aa17.25■□□□□ 0.35
CDK11B-201ENST00000340677 NIPA1Q7RTP0 329 aa17.25■□□□□ 0.35
CDK11B-201ENST00000340677 SLC15A4Q8N697 577 aa17.25■□□□□ 0.35
CDK11B-201ENST00000340677 GANCQ8TET4 914 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms