RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 DCLRE1AQ6PJP8 1040 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KYAT3Q6YP21 454 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RTN4RL1Q86UN2 441 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 LONP2Q86WA8 852 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TREML1Q86YW5 311 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NUDCD3Q8IVD9 361 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 OR6Y1Q8NGX8 325 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 AGAP2Q99490 1192 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 EPAS1Q99814 870 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 BRD8Q9H0E9 1235 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 VANGL2Q9ULK5 521 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 INPP5FQ9Y2H2 1132 aa13.27□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PEX11AO75192 247 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CST5P28325 142 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PTPN4P29074 926 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KRT72Q14CN4 511 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ARL13BQ3SXY8 428 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 OVOS1Q6IE37 1185 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 FAM43BQ6ZT52 329 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PDZD4Q76G19 769 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF669Q96BR6 464 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MFSD3Q96ES6 412 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TSGA13Q96PP4 275 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 APOL2Q9BQE5 337 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CADM1Q9BY67 442 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NMUR1Q9HB89 426 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 OSER1Q9NX31 292 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KCNK4Q9NYG8 393 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NKX1-2Q9UD57 310 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TRHDEQ9UKU6 1024 aa13.26□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MSI1O43347 362 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 LYPLA1O75608 230 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 JCHAINP01591 159 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 POLBP06746 335 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 OR4Q2P0C623 313 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MX2P20592 715 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SLC8A1P32418 973 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GP5P40197 560 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SLC5A3P53794 718 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 IRX4P78413 519 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CDK18Q07002 472 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TUBB3Q13509 450 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DBN1Q16643 649 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 FASTKD1Q53R41 847 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ATG16L1Q676U5 607 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RINLQ6ZS11 566 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 OTOP3Q7RTS5 596 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MAVSQ7Z434 540 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CMC1Q7Z7K0 106 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ARID3BQ8IVW6 561 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TRIM42Q8IWZ5 723 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PLD6Q8N2A8 252 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DCLK2Q8N568 766 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CASP10Q92851 521 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CPNE1Q99829 537 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NDFIP2Q9NV92 336 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF358Q9NW07 568 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TMEM216Q9P0N5 145 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ARMCX1Q9P291 453 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GLRA3O75311 464 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF189O75820 626 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 USP1O94782 785 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DDHD2O94830 711 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NEFHP12036 1026 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TYMPP19971 482 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ABCG1P45844 678 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 LIMK2P53671 638 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DSC1Q08554 894 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CLLU1OSQ5K130 101 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 AFMIDQ63HM1 303 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DENND5AQ6IQ26 1287 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TLDC1Q6P9B6 456 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RFWD3Q6PCD5 774 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CLEC14AQ86T13 490 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF280BQ86YH2 543 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CDKL2Q92772 493 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SORT1Q99523 831 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RBBP8Q99708 897 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 FERMT1Q9BQL6 677 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SMOC2Q9H3U7 446 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SNX15Q9NRS6 342 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 UBP1Q9NZI7 540 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MARCOQ9UEW3 520 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MCM8Q9UJA3 840 aa13.25□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms