RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ADAMTS4O75173 837 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 SPAG6O75602 509 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 KRT34O76011 436 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 POLBP06746 335 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 BPGMP07738 259 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 PIRTP0C851 137 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 ESRRAP11474 423 aaPredicted RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 HOXC8P31273 242 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 FDFT1P37268 417 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 GLUD2P49448 558 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 MXRA7P84157 204 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 MGAT3Q09327 533 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 KPNB1Q14974 876 aaKnown RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 PCLAFQ15004 111 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 PAFAH1B3Q15102 231 aaKnown RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 ARL13BQ3SXY8 428 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 TEX44Q53QW1 395 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 LGSNQ5TDP6 509 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 NAPRTQ6XQN6 538 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 METTL23Q86XA0 190 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 RNF135Q8IUD6 432 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 HIPK4Q8NE63 616 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 KLHDC9Q8NEP7 349 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 SOCS4Q8WXH5 440 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 SLC39A8Q9C0K1 460 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 FETUBQ9UGM5 382 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 SMAPO00193 183 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 CNTN5O94779 1100 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 VAPBO95292 243 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 PCSK1P29120 753 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 MAGEA6P43360 314 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SLC18A1P54219 525 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 YWHAHQ04917 246 aaPredicted RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 EFEMP1Q12805 493 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SEMA3BQ13214 749 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 PTPRCAPQ14761 206 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 PSMD5Q16401 504 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 KHDC1Q4VXA5 237 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 RAB41Q5JT25 222 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SCD5Q86SK9 330 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 PSTKQ8IV42 348 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 CDKL2Q92772 493 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SKA1Q96BD8 255 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 PABPC5Q96DU9 382 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 NUDCD1Q96RS6 583 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 NDNQ99608 321 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 EPAS1Q99814 870 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 OSBPL1AQ9BXW6 950 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 LRMDAQ9H2I8 198 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 CYP4F11Q9HBI6 524 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 FNDC3AQ9Y2H6 1198 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 HBS1LQ9Y450 684 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 SCN10AQ9Y5Y9 1956 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 A0A0U1RQS6 177 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 ZCWPW2A0A1B0GU75 182 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 KRT36O76013 467 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 NEBLO76041 1014 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 CHRNGP07510 517 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 FGF3P11487 239 aaPredicted RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 TSC2P49815 1807 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 TUBP50607 506 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 GRM3Q14832 879 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 ANKRD20A4Q4UJ75 823 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 PRRC2BQ5JSZ5 2229 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 CLLU1OSQ5K130 101 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 ESRP1Q6NXG1 681 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 MAVSQ7Z434 540 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 KCNMB4Q86W47 210 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SNX31Q8N9S9 440 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNCA-201ENST00000336904 TET1Q8NFU7 2136 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 N4BP2L2Q92802 583 aaPredicted RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 MYEOVQ96EZ4 313 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 SSU72Q9NP77 194 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 BFARQ9NZS9 450 aa9.03□□□□□ -0.96
SNCA-201ENST00000336904 TDRD15B5MCY1 1934 aaKnown RBP9.03□□□□□ -0.96
SNCA-201ENST00000336904 B2RBV5 119 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 E9PBE3 544 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 J3KR12 359 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 SEPT4O43236 478 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 KLHL41O60662 606 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 AP2A1O95782 977 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 EZRP15311 586 aaKnown RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 RPL17P18621 184 aaKnown RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 NCF2P19878 526 aaPredicted RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 SLC1A6P48664 564 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 ATXN3P54252 364 aaPredicted RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 OCRLQ01968 901 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 PPIDQ08752 370 aaKnown RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 BNIPLQ7Z465 357 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 TMCO2Q7Z6W1 182 aaPredicted RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 CHSY1Q86X52 802 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 CRLF3Q8IUI8 442 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 CFAP52Q8N1V2 620 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 ATPAF2Q8N5M1 289 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 GIPC2Q8TF65 315 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms