RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FAM131AQ6UXB0 335 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CYB5R4Q7L1T6 521 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SLFN11Q7Z7L1 901 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 KCNMB4Q86W47 210 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 RASAL3Q86YV0 1011 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CHPFQ8IZ52 775 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SPIRE2Q8WWL2 714 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ART4Q93070 314 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SPATA17Q96L03 361 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 KCTD15Q96SI1 283 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 XKR8Q9H6D3 395 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DCP1AQ9NPI6 582 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FAM217BQ9NTX9 383 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 INTS10Q9NVR2 710 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SRP68Q9UHB9 627 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF180Q9UJW8 692 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF335Q9H4Z2 1342 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TFRCP02786 760 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 NFICP08651 508 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FAM189A2Q15884 450 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 RFTN2Q52LD8 501 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 AGKQ53H12 422 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ANXA8L1Q5VT79 327 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 EIF5AL1Q6IS14 154 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DENND5BQ6ZUT9 1274 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 STK32CQ86UX6 486 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZCWPW1Q9H0M4 648 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM138Q9NPI0 162 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PADI4Q9UM07 663 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 HPSEQ9Y251 543 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DHRS7Q9Y394 339 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CFAP65Q6ZU64 1925 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 RGS10O43665 173 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TMCC2O75069 709 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 METTL18O95568 372 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ODC1P11926 461 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LCP1P13796 627 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LRRC38Q5VT99 294 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LYPLAL1Q5VWZ2 237 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM17Q86X19 198 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 NT5DC4Q86YG4 428 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 MAB21L3Q8N8X9 362 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CLPTM1LQ96KA5 538 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SLC22A4Q9H015 551 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CYP3A43Q9HB55 503 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 USP18Q9UMW8 372 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GJA3Q9Y6H8 435 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 APOC4-APOC2K7ER74 178 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SGTAO43765 313 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 APOC2P02655 101 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SERPINF2P08697 491 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 S100A2P29034 98 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 NMT1P30419 496 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MAGEA8P43361 318 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ERVK-24P63145 666 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MRPS22P82650 360 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PTSQ03393 145 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 EMC2Q15006 297 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CRTC3Q6UUV7 619 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CYP2U1Q7Z449 544 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CCDC28AQ8IWP9 274 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 OXER1Q8TDS5 423 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TAMM41Q96BW9 452 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TEFMQ96QE5 360 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 AIFM2Q9BRQ8 373 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 YTHDF1Q9BYJ9 559 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MCUBQ9NWR8 336 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TAS2R1Q9NYW7 299 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CFL2Q9Y281 166 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 RAP2CQ9Y3L5 183 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 A0A087WWV3 80 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ARPC4-TTLL3A0A0A6YYG9 625 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 KRT36O76013 467 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 NME5P56597 212 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PRKCEQ02156 737 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 RHEBQ15382 184 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SKIV2LQ15477 1246 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ZRANB3Q5FWF4 1079 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 NLGN1Q8N2Q7 840 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SRFBP1Q8NEF9 429 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 NKX2-3Q8TAU0 364 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 DPF2Q92785 391 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ITPKCQ96DU7 683 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CCSER2Q9H7U1 834 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PRMT7Q9NVM4 692 aaPredicted RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SNX4O95219 450 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 VAPBO95292 243 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CDC25AP30304 524 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CRKLP46109 303 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ADAM17P78536 824 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 R3HCC1LQ7Z5L2 792 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 FNDC5Q8NAU1 212 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ZFP28Q8NHY6 868 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 RFKQ969G6 155 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 C18orf25Q96B23 403 aaPredicted RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SLC47A1Q96FL8 570 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 THAP2Q9H0W7 228 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 G3V2T6 193 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 FGF10O15520 208 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms