RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PGAM4Q8N0Y7 254 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 C4orf33Q8N1A6 199 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 SEC14L1Q92503 715 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 C1QTNF7Q9BXJ2 289 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 RTFDC1Q9BY42 306 aaPredicted RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 KCNH4Q9UQ05 1017 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 STRCQ7RTU9 1775 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 BAIAP3O94812 1187 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 SNHG28P0DPA3 235 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 NOS2P35228 1153 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 GYS2P54840 703 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 LRRC14Q15048 493 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PLEKHM3Q6ZWE6 761 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PLPPR4Q7Z2D5 763 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ZCCHC7Q8N3Z6 543 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PPP1R10Q96QC0 940 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 GORASP1Q9BQQ3 440 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 CHST12Q9NRB3 414 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF451Q9Y4E5 1061 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PTCH2Q9Y6C5 1203 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ATP9AO75110 1047 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 APBA3O96018 575 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 RPL21P46778 160 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 WDR59Q6PJI9 974 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM139Q8IV31 216 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF606Q8WXB4 792 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ELMO2Q96JJ3 720 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TCF12Q99081 682 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 MMTAG2Q9BU76 263 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 RHOBTB2Q9BYZ6 727 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 UNC45AQ9H3U1 944 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 UBA6A0AVT1 1052 aaPredicted RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 DDX3XO00571 662 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 FOXN1O15353 648 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ADARP55265 1226 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 MIIPQ5JXC2 388 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 KCNMB4Q86W47 210 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 NUP93Q8N1F7 819 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 DIS3LQ8TF46 1054 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 NEDD4LQ96PU5 975 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 MRPL9Q9BYD2 267 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 KCTD10Q9H3F6 313 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ANAPC2Q9UJX6 822 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 EDF1O60869 148 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 CETPP11597 493 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 GSCP56915 257 aaPredicted RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PRKG2Q13237 762 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PTPN21Q16825 1174 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 MYLK4Q86YV6 388 aaPredicted RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TCP10LQ8TDR4 215 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 FAM172AQ8WUF8 416 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 RHOJQ9H4E5 214 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 SAMD4AQ9UPU9 718 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 UGT2B11O75310 529 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 MMP10P09238 476 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 STAG3L1P0CL83 205 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF7P17097 686 aaPredicted RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 JAM2P57087 298 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PCID2Q5JVF3 399 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TRIQKQ629K1 86 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 MEI4A8MW99 385 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 FGF1P05230 155 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 KITP10721 976 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 IL12RB1P42701 662 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 RARRES1P49788 294 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 GMFBP60983 142 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 SPIRE1Q08AE8 756 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 BNIP1Q12981 228 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PTRHD1Q6GMV3 140 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PACS2Q86VP3 889 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 DDX42Q86XP3 938 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 CPA5Q8WXQ8 436 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 APOL6Q9BWW8 343 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TBC1D10AQ9BXI6 508 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 PLLPQ9Y342 182 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 NRAPQ86VF7 1730 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 LIASO43766 372 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 CAPN1P07384 714 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 SLC44A2Q8IWA5 706 aaPredicted RBP8.96□□□□□ -0.97
COL6A5-202ENST00000312481 IRGQQ8WZA9 623 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 NUSAP1Q9BXS6 441 aaKnown RBP8.96□□□□□ -0.97
COL6A5-202ENST00000312481 CNGB3Q9NQW8 809 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 AGAP1Q9UPQ3 857 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 TLL2Q9Y6L7 1015 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 TRIM38O00635 465 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 B4GALT4O60513 344 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 SNRPB2P08579 225 aaKnown RBP8.96□□□□□ -0.97
COL6A5-202ENST00000312481 CAP2P40123 477 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 SLC6A3Q01959 620 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 ARMC4Q5T2S8 1044 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 FBXW8Q8N3Y1 598 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 PCSK1NQ9UHG2 260 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 PRG3Q9Y2Y8 225 aaPredicted RBP8.96□□□□□ -0.97
COL6A5-202ENST00000312481 DYRK3O43781 588 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 VCAM1P19320 739 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 CYP2A7P20853 494 aa8.96□□□□□ -0.97
COL6A5-202ENST00000312481 PIK3CBP42338 1070 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms