RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SLC39A8Q9C0K1 460 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 OLA1Q9NTK5 396 aaKnown RBP21.84■■□□□ 1.09
SOX17-201ENST00000297316 COMMD8Q9NX08 183 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 TEX28O15482 410 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 ZBTB24O43167 697 aaPredicted RBP21.84■■□□□ 1.09
SOX17-201ENST00000297316 FGF18O76093 207 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 CSH1P0DML2 217 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 CSH2P0DML3 217 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 SESN2P58004 480 aaPredicted RBP21.84■■□□□ 1.09
SOX17-201ENST00000297316 PLD1Q13393 1074 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 ZKSCAN8Q15776 578 aaPredicted RBP21.84■■□□□ 1.09
SOX17-201ENST00000297316 ALFQ53S48 1182 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 LRRC8BQ6P9F7 803 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 CTAGE3PQ8IX95 158 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 USP33Q8TEY7 942 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 DPF3Q92784 378 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 EIF2B3Q9NR50 452 aaKnown RBP21.84■■□□□ 1.09
SOX17-201ENST00000297316 SMG5Q9UPR3 1016 aaKnown RBP21.84■■□□□ 1.09
SOX17-201ENST00000297316 RAD54BQ9Y620 910 aa21.84■■□□□ 1.09
SOX17-201ENST00000297316 IGLV3-27P01718 113 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 INHBAP08476 426 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 SLC2A3P11169 496 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 TAC1P20366 129 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 MGAT1P26572 445 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 NUMBP49757 651 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 RAB33AQ14088 237 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 NUGGCQ68CJ6 796 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 TPGS2Q68CL5 300 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 CIR1Q86X95 450 aaPredicted RBP21.83■■□□□ 1.09
SOX17-201ENST00000297316 ARNTL2Q8WYA1 636 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 SPOCK2Q92563 424 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 IGSF8Q969P0 613 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 ZNF419Q96HQ0 510 aaPredicted RBP21.83■■□□□ 1.09
SOX17-201ENST00000297316 C1orf74Q96LT6 269 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 MAGEB18Q96M61 343 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 CATSPERBQ9H7T0 1116 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 GGA2Q9UJY4 613 aa21.83■■□□□ 1.09
SOX17-201ENST00000297316 ZNF840PA6NDX5 716 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 PRRG1O14668 218 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 NCAM2O15394 837 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 SYN1P17600 705 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 MX2P20592 715 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 TWF1Q12792 350 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 ZSCAN18Q8TBC5 510 aaPredicted RBP21.83■■□□□ 1.08
SOX17-201ENST00000297316 ZBED2Q9BTP6 218 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 MRPL17Q9NRX2 175 aaKnown RBP21.83■■□□□ 1.08
SOX17-201ENST00000297316 PCDHA11Q9Y5I1 949 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 CDH23Q9H251 3354 aa21.83■■□□□ 1.08
SOX17-201ENST00000297316 MYO7AQ13402 2215 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 LCHNA4D1U4 455 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 FGF10O15520 208 aaPredicted RBP21.82■■□□□ 1.08
SOX17-201ENST00000297316 ALDH1A3P47895 512 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 SLC18A1P54219 525 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 CDK16Q00536 496 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 FPGSQ05932 587 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 SPRED3Q2MJR0 410 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 NADSYN1Q6IA69 706 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 CGB2Q6NT52 195 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 FBXL22Q6P050 247 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 SPATS2Q86XZ4 545 aaKnown RBP21.82■■□□□ 1.08
SOX17-201ENST00000297316 RTL3Q8N8U3 475 aaKnown RBP21.82■■□□□ 1.08
SOX17-201ENST00000297316 GSDMBQ8TAX9 411 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 CABS1Q96KC9 395 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 BTN2A3PQ96KV6 586 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 FERMT1Q9BQL6 677 aa21.82■■□□□ 1.08
SOX17-201ENST00000297316 NOL6Q9H6R4 1146 aaKnown RBP21.82■■□□□ 1.08
SOX17-201ENST00000297316 USP12O75317 370 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 JCHAINP01591 159 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 MLNP12872 115 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 SH2D5Q6ZV89 423 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 SLC26A11Q86WA9 606 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 FIBCD1Q8N539 461 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 ATP6V0D2Q8N8Y2 350 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 BANPQ8N9N5 519 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 STAMBPL1Q96FJ0 436 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 OXNAD1Q96HP4 312 aaPredicted RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 SYBUQ9NX95 663 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 SLC17A6Q9P2U8 582 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 PRKAG2Q9UGJ0 569 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 PCDHB12Q9Y5F1 795 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 TRDMT1O14717 391 aaKnown RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 COCHO43405 550 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 SARNPP82979 210 aaKnown RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 HTRA4P83105 476 aaPredicted RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 IL9RQ01113 521 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 NRG1Q02297 640 aaPredicted RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 TMEM240Q5SV17 173 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 MICALCLQ6ZW33 695 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 LRRC6Q86X45 466 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 KLHL23Q8NBE8 558 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 MLPHQ9BV36 600 aaPredicted RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 SSU72Q9NP77 194 aaKnown RBP21.81■■□□□ 1.08
SOX17-201ENST00000297316 SLC17A7Q9P2U7 560 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 IKBKGQ9Y6K9 419 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 DOCK6Q96HP0 2047 aa21.81■■□□□ 1.08
SOX17-201ENST00000297316 RANBP2P49792 3224 aaKnown RBP21.8■■□□□ 1.08
SOX17-201ENST00000297316 C2orf78A6NCI8 922 aa21.8■■□□□ 1.08
SOX17-201ENST00000297316 FAM159BA6NKW6 160 aa21.8■■□□□ 1.08
SOX17-201ENST00000297316 LILRB3O75022 631 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms