RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CD97P48960 835 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 CSRP3P50461 194 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 OSTNP61366 133 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 COG7P83436 770 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 MYBPC1Q00872 1141 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 LPIN1Q14693 890 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 CDO1Q16878 200 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 TCHHL1Q5QJ38 904 aaPredicted RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 KLHL35Q6PF15 583 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 EPGNQ6UW88 154 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 CLEC14AQ86T13 490 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 LRRC52Q8N7C0 313 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 SNRNP27Q8WVK2 155 aaKnown RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 KCTD15Q96SI1 283 aaPredicted RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 ZIC5Q96T25 663 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 AP4E1Q9UPM8 1137 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 KAT6AQ92794 2004 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 E9PBE3 544 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 NOP56O00567 594 aaKnown RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 GP5P40197 560 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 ACADSBP45954 432 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 PRKAA2P54646 552 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 TREML2Q5T2D2 321 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 PPP1R26Q5T8A7 1209 aaPredicted RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 TRIM67Q6ZTA4 783 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 ERI1Q8IV48 349 aaKnown RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 BBS5Q8N3I7 341 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 RSPH1Q8WYR4 309 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 CNBD2Q96M20 576 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 LRGUKQ96M69 825 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 PRPF18Q99633 342 aaKnown RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 MCMBPQ9BTE3 642 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 FAIMQ9NVQ4 179 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 WDR37Q9Y2I8 494 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 CEPT1Q9Y6K0 416 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 MPOP05164 745 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 CDH2P19022 906 aaPredicted RBP10.59□□□□□ -0.71
SKA1-201ENST00000285116 SLC44A4Q53GD3 710 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 SYCP2LQ5T4T6 812 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 PDPK2PQ6A1A2 396 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 SCYL2Q6P3W7 929 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 ZCCHC23Q6ZST2 131 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 ADCY4Q8NFM4 1077 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 ERAP1Q9NZ08 941 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 APPL1Q9UKG1 709 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 ARHGAP26Q9UNA1 814 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 PDE4DIPQ5VU43 2346 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 CNMDO75829 334 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 RALBP11234 206 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 GLDCP23378 1020 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 HADHAP40939 763 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 RPL10AP62906 217 aaKnown RBP10.59□□□□□ -0.71
SKA1-201ENST00000285116 VGLL4Q14135 290 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
SKA1-201ENST00000285116 DCAF4L1Q3SXM0 396 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 TRIM50Q86XT4 487 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 GPC2Q8N158 579 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 RDH11Q8TC12 318 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 SPATA33Q96N06 139 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 TSPAN18Q96SJ8 248 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 FERMT1Q9BQL6 677 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 CDH19Q9H159 772 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 RSL24D1Q9UHA3 163 aaKnown RBP10.59□□□□□ -0.71
SKA1-201ENST00000285116 MID2Q9UJV3 735 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 FZD10Q9ULW2 581 aa10.59□□□□□ -0.71
SKA1-201ENST00000285116 H3BSA7 217 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 IDO1P14902 403 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ARF4P18085 180 aaPredicted RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 ADORA2AP29274 412 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 CLCN3P51790 818 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 PHEXP78562 749 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 PLOD1Q02809 727 aaPredicted RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 BST2Q10589 180 aaKnown RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 HERC3Q15034 1050 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ZBTB6Q15916 424 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ZFP1Q6P2D0 407 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 IYDQ6PHW0 289 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 LIMS2Q7Z4I7 341 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 CRYBG2Q8N1P7 616 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 CPSF7Q8N684 471 aaKnown RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 SMYD1Q8NB12 490 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 NT5C3BQ969T7 300 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 HSFY1Q96LI6 401 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 HAUS8Q9BT25 410 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 FAF1Q9UNN5 650 aaPredicted RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 ZNF232Q9UNY5 417 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 SCN1AP35498 2009 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 MAGEB3O15480 346 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 LYPLA1O75608 230 aaPredicted RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 GRAP2O75791 330 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 FBXO21O94952 628 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 APOA4P06727 396 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 POLBP06746 335 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 GRIA1P42261 906 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 LIMK2P53671 638 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 BCAT1P54687 386 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms