RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 NECAB2Q7Z6G3 386 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RNASE11Q8TAA1 199 aaKnown RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF671Q8TAW3 534 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RXFP2Q8WXD0 754 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 NELL1Q92832 810 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RNF145Q96MT1 663 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 AGO4Q9HCK5 861 aaKnown RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ING4Q9UNL4 249 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ANGPT4Q9Y264 503 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 CHD4Q14839 1912 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 OPLAHO14841 1288 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MFN2O95140 757 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ATP4AP20648 1035 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 HIRAP54198 1017 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 NKX1-1Q15270 411 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 BNIPLQ7Z465 357 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 POMKQ9H5K3 350 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 GNPTGQ9UJJ9 305 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 DNPEPQ9ULA0 475 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 TAF4O00268 1085 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 AXLP30530 894 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 VN1R5Q7Z5H4 357 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 CCDC36Q8IYA8 594 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 PLGRKTQ9HBL7 147 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 COMMD9Q9P000 198 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 PRKAR1AP10644 381 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 GSTT1P30711 240 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 THPOP40225 353 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MAPK11Q15759 364 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 TTC23Q5W5X9 447 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MSL3Q8N5Y2 521 aaKnown RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 BBS4Q96RK4 519 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 AKAP7Q9P0M2 348 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 SAGE2PA6NJ88 616 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 THP07101 528 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CKBP12277 381 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ITGB6P18564 788 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 OGNP20774 298 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ALDH5A1P51649 535 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PLCL1Q15111 1095 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF655Q8N720 491 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 FBXO28Q9NVF7 368 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SAE1Q9UBE0 346 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PCDHA11Q9Y5I1 949 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 APOC4-APOC2K7ER74 178 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 JCHAINP01591 159 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 APOC2P02655 101 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 GCLCP48506 637 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TNK2Q07912 1038 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ADIGQ0VDE8 80 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM119Q4V9L6 283 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM63BQ5T3F8 832 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 MARC1Q5VT66 337 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TRIT1Q9H3H1 467 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ENTPD7Q9NQZ7 604 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 DYNC1LI2O43237 492 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PARNO95453 639 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CXCR2P25025 360 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CTXN3Q4LDR2 81 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SLC44A2Q8IWA5 706 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 C4orf19Q8IY42 314 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 IZUMO1Q8IYV9 350 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 LENG1Q96BZ8 264 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TBATAQ96M53 351 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 S100A13Q99584 98 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 MRPL57Q9BQC6 102 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CBWD1Q9BRT8 395 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 GRIP2Q9C0E4 1043 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 XPNPEP3Q9NQH7 507 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TUBA8Q9NY65 449 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 IGSF6O95976 241 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CAPGP40121 348 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TBX4P57082 545 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM62Q0P6H9 643 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 NR1D2Q14995 579 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 QPRTQ15274 297 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 DHDDSQ86SQ9 333 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PAIP1Q9H074 479 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PCYOX1Q9UHG3 505 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ATP6V1HQ9UI12 483 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 MYH13Q9UKX3 1938 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SSNA1O43805 119 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 RAMP2O60895 175 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CYP2C18P33260 490 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SLC26A3P40879 764 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TRIM32Q13049 653 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 LRRC38Q5VT99 294 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SYTL1Q8IYJ3 562 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 NFKBIZQ9BYH8 718 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 NUAK2Q9H093 628 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 GALNT8Q9NY28 637 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ATF5Q9Y2D1 282 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms