RNA–Protein interactions for RNA: ENST00000265195.9

SIL1-201, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SIL1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-201ENST00000265195 SH3RF2Q8TEC5 729 aa17.73■□□□□ 0.43
SIL1-201ENST00000265195 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.73■□□□□ 0.439e-8■■■■■ 72
SIL1-201ENST00000265195 DDX50Q9BQ39 737 aaKnown RBP17.73■□□□□ 0.43
SIL1-201ENST00000265195 ARFGAP3Q9NP61 516 aa17.73■□□□□ 0.43
SIL1-201ENST00000265195 DOCK8Q8NF50 2099 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 DOCK4Q8N1I0 1966 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 KCNK1O00180 336 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 DNALI1O14645 258 aaPredicted RBP17.72■□□□□ 0.43
SIL1-201ENST00000265195 PAPOLAP51003 745 aaKnown RBP17.72■□□□□ 0.43
SIL1-201ENST00000265195 NDST2P52849 883 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 CALCOCO2Q13137 446 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 RABGAP1LQ5R372 815 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 RHBDF2Q6PJF5 856 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 BBS7Q8IWZ6 715 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 TAB3Q8N5C8 712 aaPredicted RBP17.72■□□□□ 0.43
SIL1-201ENST00000265195 ZSCAN18Q8TBC5 510 aaPredicted RBP17.72■□□□□ 0.43
SIL1-201ENST00000265195 LRRC45Q96CN5 670 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 TDP1Q9NUW8 608 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
SIL1-201ENST00000265195 LSM7Q9UK45 103 aaKnown RBP17.72■□□□□ 0.43
SIL1-201ENST00000265195 TPX2Q9ULW0 747 aaKnown RBP17.72■□□□□ 0.43
SIL1-201ENST00000265195 MAFKO60675 156 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 PRAMEF12O95522 483 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 OR1E1P30953 314 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 MTHFRP42898 656 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 CDH4P55283 916 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 MAP9Q49MG5 647 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 HIBCHQ6NVY1 386 aaPredicted RBP17.71■□□□□ 0.43
SIL1-201ENST00000265195 ATXN2LQ8WWM7 1075 aaKnown RBP17.71■□□□□ 0.43
SIL1-201ENST00000265195 RIPOR3Q96MK2 946 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 TSGA13Q96PP4 275 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 RETREG1Q9H6L5 497 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ZNF446Q9NWS9 450 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 PAK5Q9P286 719 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ANAPC5Q9UJX4 755 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ZNF510Q9Y2H8 683 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
SIL1-201ENST00000265195 RASA4BC9J798 803 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 RASA4O43374 803 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 CCNCP24863 283 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 MAPKAPK2P49137 400 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ANKRD20A2Q5SQ80 823 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 RNASEH2BQ5TBB1 312 aaKnown RBP17.71■□□□□ 0.43
SIL1-201ENST00000265195 ANKRD20A1Q5TYW2 823 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ANKRD20A3Q5VUR7 823 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 EMBQ6PCB8 327 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ARID3BQ8IVW6 561 aaPredicted RBP17.71■□□□□ 0.43
SIL1-201ENST00000265195 CCDC13Q8IYE1 715 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 BBOF1Q8ND07 529 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 OR52K2Q8NGK3 314 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 HMCESQ96FZ2 354 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 CEP41Q9BYV8 373 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 SEPT10Q9P0V9 454 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 ZMYM5Q9UJ78 669 aa17.71■□□□□ 0.43
SIL1-201ENST00000265195 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.7■□□□□ 0.42
SIL1-201ENST00000265195 A0A0A0MRY4 1105 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 RNF103O00237 685 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 CLDN11O75508 207 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 METTL18O95568 372 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 PTPN3P26045 913 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 ACTN2P35609 894 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 ZNF33AQ06730 810 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 AAK1Q2M2I8 961 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 ZNF567Q8N184 647 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 ATPAF2Q8N5M1 289 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 CPT1BQ92523 772 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 CAVIN3Q969G5 261 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 TMA16Q96EY4 203 aaKnown RBP17.7■□□□□ 0.42
SIL1-201ENST00000265195 SPATA13Q96N96 652 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 ASB2Q96Q27 587 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 FMO2Q99518 471 aa17.7■□□□□ 0.42
SIL1-201ENST00000265195 FARP1Q9Y4F1 1045 aaPredicted RBP17.7■□□□□ 0.42
SIL1-201ENST00000265195 E2F8A0AVK6 867 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 RAMP2O60895 175 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 BMP1P13497 986 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 POLD3Q15054 466 aaPredicted RBP17.69■□□□□ 0.42
SIL1-201ENST00000265195 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 LRRC49Q8IUZ0 686 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.69■□□□□ 0.42
SIL1-201ENST00000265195 CPXM2Q8N436 756 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 NECTIN4Q96NY8 510 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 FAM129AQ9BZQ8 928 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 IPO11Q9UI26 975 aaKnown RBP17.69■□□□□ 0.42
SIL1-201ENST00000265195 A0A1B0GVM2 712 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 TCRBV7S3A2A0A539 114 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 TCAF2A6NFQ2 919 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 TBL1XO60907 577 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 ACVRL1P37023 503 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 YBEYP58557 167 aaPredicted RBP17.69■□□□□ 0.42
SIL1-201ENST00000265195 CAV1Q03135 178 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 ZBTB17Q13105 803 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 PUS10Q3MIT2 529 aaKnown RBP17.69■□□□□ 0.42
SIL1-201ENST00000265195 ANKRD22Q5VYY1 191 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 NAT8LQ8N9F0 302 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 PWWP2AQ96N64 755 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 FERMT1Q9BQL6 677 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 ETNK1Q9HBU6 452 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 RAB6BQ9NRW1 208 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 TBC1D30Q9Y2I9 924 aa17.69■□□□□ 0.42
SIL1-201ENST00000265195 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms