RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 NEK10Q6ZWH5 1172 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 UNC5BQ8IZJ1 945 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GIPC2Q8TF65 315 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 HEXIM2Q96MH2 286 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ASB2Q96Q27 587 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 WRNIP1Q96S55 665 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 C20orf27Q9GZN8 174 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 EIF2B3Q9NR50 452 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PNPLA3Q9NST1 481 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TUBA8Q9NY65 449 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 HOXC10Q9NYD6 342 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SCHIP1Q9P0W5 487 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SIRPGQ9P1W8 387 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ARHGEF37A1IGU5 675 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 HHLA1C9JL84 531 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TRIM13O60858 407 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TRPA1O75762 1119 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SRP72O76094 671 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 EFEMP2O95967 443 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SRGAP2CP0DJJ0 459 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 VCLP18206 1134 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TKTP29401 623 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF143P52747 638 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RBP5P82980 135 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 KRR1Q13601 381 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 HNRNPDQ14103 355 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CLEC14AQ86T13 490 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PSTKQ8IV42 348 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF513Q8N8E2 541 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 LEMD2Q8NC56 503 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 HM13Q8TCT9 377 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CALML6Q8TD86 181 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 EBNA1BP2Q99848 306 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 YTHDF1Q9BYJ9 559 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 MAGEB5Q9BZ81 275 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ANLNQ9NQW6 1124 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM30AQ9NV96 361 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CNOT11Q9UKZ1 510 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 AP3M1Q9Y2T2 418 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SAC3D1A6NKF1 404 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 E5RJQ4 531 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CRCPO75575 148 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 KITP10721 976 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 COL6A2P12110 1019 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RAG1P15918 1043 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TUBA4AP68366 448 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 EPS8Q12929 822 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CDC16Q13042 620 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 LSAMPQ13449 338 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 DPYSL2Q16555 572 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 LY6KQ17RY6 165 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RAB41Q5JT25 222 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SH3PXD2AQ5TCZ1 1133 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 KIAA1841Q6NSI8 718 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 BORAQ6PGQ7 559 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PATL1Q86TB9 770 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF554Q86TJ5 538 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ERO1BQ86YB8 467 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 UNC45BQ8IWX7 931 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PACRGLQ8N7B6 248 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CNTD1Q8N815 330 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RBM15BQ8NDT2 890 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PNPT1Q8TCS8 783 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TFB1MQ8WVM0 346 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GATA6Q92908 595 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TSPAN18Q96SJ8 248 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 VAT1Q99536 393 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 AP5M1Q9H0R1 490 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NGRNQ9NPE2 291 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TCF7L2Q9NQB0 619 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PRMT7Q9NVM4 692 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GDAP2Q9NXN4 497 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NKX1-2Q9UD57 310 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PTBP2Q9UKA9 531 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ORC6Q9Y5N6 252 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PLXNB3Q9ULL4 1909 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC195A0A1B0GUA6 201 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TCRBV9S1A1TA0A576 114 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GRXCR2A6NFK2 248 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 FAM159BA6NKW6 160 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GABRDO14764 452 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 AREL1O15033 823 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 HNRNPRO43390 633 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TBX10O75333 385 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 DEAF1O75398 565 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NPY2RP49146 381 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 KIAA0319Q5VV43 1072 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 DEFB107AQ8IZN7 70 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CRYBG2Q8N1P7 616 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 DNAAF3Q8N9W5 541 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RFWD2Q8NHY2 731 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PPTC7Q8NI37 304 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SPOCK2Q92563 424 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RMND5BQ96G75 393 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ASB7Q9H672 318 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PLEKHA5Q9HAU0 1116 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CYP4F11Q9HBI6 524 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 STK39Q9UEW8 545 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 KIF26AQ9ULI4 1882 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms