RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 OGTO15294 1046 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 LGR5O75473 907 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 VAPBO95292 243 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 PGK1P00558 417 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 GRB10Q13322 594 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 PTPAQ15257 358 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 PAGE2BQ5JRK9 111 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 RNF220Q5VTB9 566 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CES3Q6UWW8 571 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 FAM131AQ6UXB0 335 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MFSD7Q6UXD7 560 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CHPFQ8IZ52 775 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TCF12Q99081 682 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MTMR12Q9C0I1 747 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.161e-7■■■■□ 22.6
TARDBP-201ENST00000240185 ZNF446Q9NWS9 450 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 RPL26L1Q9UNX3 145 aaKnown RBP14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TBC1D30Q9Y2I9 924 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MATN2O00339 956 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 NCAM2O15394 837 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TFRCP02786 760 aaKnown RBP14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CCDC166P0CW27 439 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 SEPHS1P49903 392 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TDRD10Q5VZ19 366 aaKnown RBP14.07□□□□□ -0.16
TARDBP-201ENST00000240185 EFCAB12Q6NXP0 572 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 IL27RAQ6UWB1 636 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MARK4Q96L34 752 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 A0A0X1KG70 313 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 EME2A4GXA9 379 aaPredicted RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 STX16-NPEPL1H3BU86 382 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 STX16O14662 325 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 ATP6V1G1O75348 118 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 SNRPB2P08579 225 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 RBBP4Q09028 425 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 SWI5Q1ZZU3 235 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 NEK5Q6P3R8 708 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 EFCAB3Q8N7B9 438 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 FAM84BQ96KN1 310 aaPredicted RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 PRELID1Q9Y255 219 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 C21orf2O43822 256 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 UQCRBP14927 111 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 MYL9P24844 172 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CCR1P32246 355 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 HMGCS2P54868 508 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 RBM43Q6ZSC3 357 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 RAB43Q86YS6 212 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 SYT12Q8IV01 421 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 ETNPPLQ8TBG4 499 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 APBA2Q99767 749 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 RACGAP1Q9H0H5 632 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 C17orf75Q9HAS0 396 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CCNB1IP1Q9NPC3 277 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 C12orf4Q9NQ89 552 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 NKIRAS2Q9NYR9 191 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 PGRMC2O15173 223 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 LSM8O95777 96 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 MED22Q15528 200 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 GLB1LQ6UWU2 654 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CLEC10AQ8IUN9 316 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 DNAJB14Q8TBM8 379 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 PTGS2P35354 604 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 OMPP47874 163 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 OR1G1P47890 313 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CDK9P50750 372 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 ARHGDIBP52566 201 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CBFBQ13951 182 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 INTS11Q5TA45 600 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 AAGABQ6PD74 315 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CREG2Q8IUH2 290 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 FAM47BQ8NA70 645 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 ZNF398Q8TD17 642 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 NSUN4Q96CB9 384 aaKnown RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 FRMD6Q96NE9 622 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 HGH1Q9BTY7 390 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 PLA2G4CQ9UP65 541 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 MAPRE3Q9UPY8 281 aa14.06□□□□□ -0.16
TARDBP-201ENST00000240185 MTF2Q9Y483 593 aaPredicted RBP14.06□□□□□ -0.16
TARDBP-201ENST00000240185 CYP2A7P20853 494 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 XIAPP98170 497 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 DDR1Q08345 913 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 RRP1BQ14684 758 aaKnown RBP14.05□□□□□ -0.16
TARDBP-201ENST00000240185 ZCCHC9Q8N567 271 aaKnown RBP14.05□□□□□ -0.16
TARDBP-201ENST00000240185 TTLL6Q8N841 843 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 CBWD1Q9BRT8 395 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 FKBP14Q9NWM8 211 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 UBQLN1Q9UMX0 589 aaKnown RBP14.05□□□□□ -0.16
TARDBP-201ENST00000240185 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
TARDBP-201ENST00000240185 ZNF806P0C7X5 589 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 ATF6P18850 670 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 POLNQ7Z5Q5 900 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 USP7Q93009 1102 aa14.05□□□□□ -0.16
TARDBP-201ENST00000240185 HAVCR1Q96D42 359 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms