RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ZNF449Q6P9G9 518 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 UMODL1-AS1Q8N2C9 162 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 CCDC197Q8NCU1 140 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 OR52K1Q8NGK4 314 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 IL12RB2Q99665 862 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 GORASP1Q9BQQ3 440 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 MLPHQ9BV36 600 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 PRDM5Q9NQX1 630 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 PRDM4Q9UKN5 801 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 HBS1LQ9Y450 684 aaKnown RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 MAGEB16A2A368 324 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 CXorf49A8MYA2 514 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 C2CD2LO14523 706 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ADAM12O43184 909 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 CACNG3O60359 315 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 RPL17P18621 184 aaKnown RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 LAG3P18627 525 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 PAPOLAP51003 745 aaKnown RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 WDR4P57081 412 aaKnown RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 CRYMQ14894 314 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 TRMT10BQ6PF06 316 aaKnown RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 ARHGAP36Q6ZRI8 547 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ZNF683Q8IZ20 524 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 BANPQ8N9N5 519 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ZNF461Q8TAF7 563 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ZSCAN18Q8TBC5 510 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 USP33Q8TEY7 942 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ARNTL2Q8WYA1 636 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ZNF689Q96CS4 500 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 ZNF512Q96ME7 567 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 FCRL5Q96RD9 977 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 NACA2Q9H009 215 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 TMEM248Q9NWD8 314 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 FAM169AQ9Y6X4 670 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 IGLV3-10A0A075B6K4 115 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 TRIM49D1C9J1S8 452 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 LPXNO60711 386 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 FAM155BO75949 473 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 HMBSP08397 361 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CSH1P0DML2 217 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CSH2P0DML3 217 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 ATP5C1P36542 298 aaKnown RBP17.77■□□□□ 0.44
VRK1-201ENST00000216639 GJA8P48165 433 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CRADDP78560 199 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 DSG1Q02413 1049 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CDH17Q12864 832 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 BTG3Q14201 252 aaPredicted RBP17.77■□□□□ 0.44
VRK1-201ENST00000216639 ARTNQ5T4W7 220 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 FBXO46Q6PJ61 603 aaPredicted RBP17.77■□□□□ 0.44
VRK1-201ENST00000216639 MARK2Q7KZI7 788 aaKnown RBP17.77■□□□□ 0.44
VRK1-201ENST00000216639 PIGWQ7Z7B1 504 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CMTR2Q8IYT2 770 aaKnown RBP17.77■□□□□ 0.44
VRK1-201ENST00000216639 SLC39A11Q8N1S5 342 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 APOPT1Q96IL0 206 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CLSTN3Q9BQT9 956 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 HERC2P3Q9BVR0 1158 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 CCSER2Q9H7U1 834 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 SMYD2Q9NRG4 433 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 PIH1D1Q9NWS0 290 aaKnown RBP17.77■□□□□ 0.44
VRK1-201ENST00000216639 DNMT3LQ9UJW3 386 aa17.77■□□□□ 0.44
VRK1-201ENST00000216639 TIMP1P01033 207 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 ALDH1A3P47895 512 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 GEMP55040 296 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 SLC18A2Q05940 514 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 ITIH4Q14624 930 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 SNX30Q5VWJ9 437 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 RAP1GAP2Q684P5 730 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 LVRNQ6Q4G3 990 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 YTHDF3Q7Z739 585 aaKnown RBP17.76■□□□□ 0.43
VRK1-201ENST00000216639 SRLQ86TD4 932 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 KLHDC8BQ8IXV7 354 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 CNTD1Q8N815 330 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 NSMCE1Q8WV22 266 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 FATE1Q969F0 183 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 OXNAD1Q96HP4 312 aaPredicted RBP17.76■□□□□ 0.43
VRK1-201ENST00000216639 TRIM56Q9BRZ2 755 aaKnown RBP17.76■□□□□ 0.43
VRK1-201ENST00000216639 IL22Q9GZX6 179 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 IQCGQ9H095 443 aaKnown RBP17.76■□□□□ 0.43
VRK1-201ENST00000216639 GLOD4Q9HC38 313 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 NDFIP2Q9NV92 336 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 RBM22Q9NW64 420 aaKnown RBP eCLIP17.76■□□□□ 0.437e-6■■■■□ 24.6
VRK1-201ENST00000216639 IPO11Q9UI26 975 aaKnown RBP17.76■□□□□ 0.43
VRK1-201ENST00000216639 RRP15Q9Y3B9 282 aaKnown RBP17.76■□□□□ 0.43
VRK1-201ENST00000216639 RPS6KL1Q9Y6S9 549 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 GREB1Q4ZG55 1949 aa17.76■□□□□ 0.43
VRK1-201ENST00000216639 DRGXA6NNA5 263 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 GOLGA8RI6L899 631 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 USP12O75317 370 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 ABLIM3O94929 683 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 RENBPP51606 427 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 MGAT5Q09328 741 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 TAF12Q16514 161 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 PDK4Q16654 411 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 FBXL22Q6P050 247 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 RGS9BPQ6ZS82 235 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 TFAP2DQ7Z6R9 452 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 CHSY1Q86X52 802 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 TCP10LQ8TDR4 215 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 ARMC5Q96C12 935 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms