RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ZNF112Q9UJU3 913 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 SYNPO2Q9UMS6 1093 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 GTF2A1LQ9UNN4 478 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
MBD3-201ENST00000156825 ACADSP16219 412 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 ABL2P42684 1182 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 CCDC153Q494R4 210 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 FNDC3BQ53EP0 1204 aaKnown RBP19.16■□□□□ 0.66
MBD3-201ENST00000156825 TRAPPC5Q8IUR0 188 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 SLC41A1Q8IVJ1 513 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 C4orf32Q8N8J7 132 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 MRPL45Q9BRJ2 306 aaKnown RBP19.16■□□□□ 0.66
MBD3-201ENST00000156825 TBC1D12O60347 775 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 IRF2BP1Q8IU81 584 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 PSTKQ8IV42 348 aaKnown RBP19.16■□□□□ 0.66
MBD3-201ENST00000156825 FBXO10Q9UK96 956 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 TMCC3Q9ULS5 477 aa19.16■□□□□ 0.66
MBD3-201ENST00000156825 CLK2P49760 499 aaKnown RBP19.15■□□□□ 0.66
MBD3-201ENST00000156825 CRYMQ14894 314 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 OASLQ15646 514 aaKnown RBP19.15■□□□□ 0.66
MBD3-201ENST00000156825 CRY2Q49AN0 593 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 NDRG1Q92597 394 aaKnown RBP19.15■□□□□ 0.66
MBD3-201ENST00000156825 CCDC3Q9BQI4 270 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 CORO1BQ9BR76 489 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 TBCDQ9BTW9 1192 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 POLG2Q9UHN1 485 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 SPACA6W5XKT8 324 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 TBC1D3BA6NDS4 549 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 HACD1B0YJ81 288 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 FARP2O94887 1054 aaPredicted RBP19.15■□□□□ 0.66
MBD3-201ENST00000156825 SPATA31D3P0C874 917 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 ELNP15502 786 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 TYMPP19971 482 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 CRABP2P29373 138 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 NCKAP1LP55160 1127 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 CSTF3Q12996 717 aaKnown RBP19.15■□□□□ 0.66
MBD3-201ENST00000156825 SPATA31D4Q6ZUB0 917 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 ANKRD52Q8NB46 1076 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 MPP6Q9NZW5 540 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 EFCAB14O75071 495 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 PROCP04070 461 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 HSMCR30P0CW71 290 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 SP3Q02447 781 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 CDRT15Q96T59 188 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 ERCC2P18074 760 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 PLPPR4Q7Z2D5 763 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 KRT78Q8N1N4 520 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 KRT84Q9NSB2 600 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 NDUFAF1Q9Y375 327 aa19.15■□□□□ 0.66
MBD3-201ENST00000156825 MRASO14807 208 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 ZMPSTE24O75844 475 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 NOMO2Q5JPE7 1267 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 SLC9A9Q8IVB4 645 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 PCDH20Q8N6Y1 951 aaKnown RBP19.14■□□□□ 0.66
MBD3-201ENST00000156825 KREMEN1Q96MU8 473 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 ZNF446Q9NWS9 450 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 ARL15Q9NXU5 204 aa19.14■□□□□ 0.66
MBD3-201ENST00000156825 CCDC166P0CW27 439 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 CCNB1P14635 433 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 CCT8P50990 548 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 KIAA2013Q8IYS2 634 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 UTP15Q8TED0 518 aaKnown RBP19.14■□□□□ 0.65
MBD3-201ENST00000156825 HSFY1Q96LI6 401 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 HGH1Q9BTY7 390 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 CXorf56Q9H5V9 222 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 BSNDQ8WZ55 320 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 TNFRSF25Q93038 417 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 PGM2Q96G03 612 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 SEMA3CQ99985 751 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 TSEN34Q9BSV6 310 aaKnown RBP19.14■□□□□ 0.65
MBD3-201ENST00000156825 STN1Q9H668 368 aaKnown RBP19.14■□□□□ 0.65
MBD3-201ENST00000156825 SPG21Q9NZD8 308 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 TUBGCP4Q9UGJ1 667 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 CAMTA1Q9Y6Y1 1673 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 TMEM114B3SHH9 223 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 HPGDP15428 266 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 CYP2A7P20853 494 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 FLT3LGP49771 235 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 MCOLN3Q8TDD5 553 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 EMID1Q96A84 441 aaPredicted RBP19.14■□□□□ 0.65
MBD3-201ENST00000156825 FAM237BA0A1B0GVD1 139 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 SLC15A5A6NIM6 579 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 IGFBP4P22692 258 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 IL27RAQ6UWB1 636 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 SCIMPQ6UWF3 145 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 LENG9Q96B70 501 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 PCDHB18PQ96TA0 734 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 CROTQ9UKG9 612 aa19.14■□□□□ 0.65
MBD3-201ENST00000156825 REXO2Q9Y3B8 237 aaKnown RBP19.14■□□□□ 0.65
MBD3-201ENST00000156825 HECTD3Q5T447 861 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 FBXL19Q6PCT2 694 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 TMEM245Q9H330 911 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 VPS45Q9NRW7 570 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 MRPL17Q9NRX2 175 aaKnown RBP19.13■□□□□ 0.65
MBD3-201ENST00000156825 ARHGEF9O43307 516 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 TPD52L3Q96J77 140 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 AUHQ13825 339 aaKnown RBP19.13■□□□□ 0.65
MBD3-201ENST00000156825 CRY1Q16526 586 aa19.13■□□□□ 0.65
MBD3-201ENST00000156825 MTSS1LQ765P7 747 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms