RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Pcyox1lQ8C7K6 495 aa15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 TraipQ8VIG6 470 aa15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 TfQ921I1 697 aa15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Stard13Q923Q2 1113 aa15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 AenQ9CZI9 336 aaKnown RBP15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Rasgef1cQ9D300 466 aa15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mxra8Q9DBV4 442 aa15.8■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Reps1O54916 795 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 JundP15066 341 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pkn2Q8BWW9 983 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Bhlhe22Q8C6A8 355 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 CherpQ8CGZ0 936 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Stk25Q9Z2W1 426 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Znf609Q8BZ47 1413 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pabpc1P29341 636 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Slfn4Q3UV66 602 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Man1c1Q6NXK9 625 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Zbtb33Q8BN78 671 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Olfr330Q8VGD9 315 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pgm3Q9CYR6 542 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Wdsub1Q9D0I6 474 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Chst7Q9EP78 484 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Tcirg1Q9JHF5 834 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 AadatQ9WVM8 425 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mov10P23249 1004 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Glb1P23780 647 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Glud1P26443 558 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Gbx2P48031 348 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pdap1Q3UHX2 181 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Znf280dQ68FE8 974 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Best3Q6H1V1 669 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Tcaf3Q6QR59 914 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Trub1Q8C0D0 338 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mettl3Q8C3P7 580 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mboat7Q8CHK3 473 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Phc3Q8CHP6 981 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Sbk1Q8QZX0 417 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mtg1Q8R2R6 326 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 FktnQ8R507 461 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mtif2Q91YJ5 727 aaKnown RBP15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Nedd8P29595 81 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pnpla5Q32LZ8 432 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Lrrc8bQ5DU41 803 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Cyb5d1Q5NCY3 228 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Fnip1Q68FD7 1165 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Ildr1Q8CBR1 537 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Sash3Q8K352 380 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Chrna3Q8R4G9 499 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Hes6Q9JHE6 224 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Atp6v1c1Q9Z1G3 382 aa15.79■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Nipsnap3aB1AWZ3 247 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pcdh10E9PXQ7 1057 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Asna1O54984 348 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 HunkO88866 714 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Aldh2P47738 519 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 NrlP54846 237 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Ddr1Q03146 911 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Trpc5osQ3UHV4 110 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Zfp868Q3UTQ6 422 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Krt76Q3UV17 594 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Clcn5Q9WVD4 746 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Kif1aP33173 1695 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Meis2P97367 477 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Lpcat1Q3TFD2 534 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Ccdc61Q3UJV1 511 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 C1orf109Q499E6 217 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 E2f5Q61502 335 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Cdc14bQ6PFY9 485 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Tmcc2Q80W04 706 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 1700001J03RikQ80ZR8 219 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Rnf219Q8K2Y0 722 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Olfr589Q8VGV8 317 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Bap1Q99PU7 728 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Commd8Q9CZG3 183 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Slc4a5E9Q3M5 1116 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 PrkchP23298 683 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Htr3aP23979 487 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Pcbp1P60335 356 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Rps7P62082 194 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Larp7Q05CL8 570 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Ndst1Q3UHN9 882 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Sema3cQ62181 751 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 TsnQ62348 228 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Ahcyl1Q80SW1 530 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Klhl12Q8BZM0 568 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Thap11Q9JJD0 305 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Zc3h7aE9PWW6 970 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Mtnd2P03893 345 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Itga7Q61738 1179 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 ZyxQ62523 564 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Gpsm1Q6IR34 673 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Socs4Q91ZA6 436 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Prpf19Q99KP6 504 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Itfg1Q99KW9 610 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Cep97Q9CZ62 856 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 GarsQ9CZD3 729 aaKnown RBP15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Egfl7Q9QXT5 275 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Cyb561d2Q9WUE3 222 aa15.78■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Slfn3A0A1L1STQ7 640 aa15.77■□□□□ 0.12
Pcdha9-201ENSMUST00000115659 Fam171a1A2ATK9 892 aa15.77■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms