RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 TfQ921I1 697 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 4931406B18RikA2RSL7 367 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 DgkdE9PUQ8 1220 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Krt83E9Q1Y9 479 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rdh7O88451 316 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 YwhaqP68254 245 aaKnown RBP14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 CkbQ04447 381 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Phactr1Q2M3X8 580 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ntrk1Q3UFB7 799 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cyp2j13Q3UNV4 503 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tp53i13Q5F267 385 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tll1Q62381 1013 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gja3Q64448 417 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Atg16l2Q6KAU8 623 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hyal5Q812F3 526 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zbtb46Q8BID6 600 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Epha10Q8BYG9 1007 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr393Q8VGR6 312 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Iqsec2Q5DU25 1478 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 NadkP58058 439 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mapk10Q61831 464 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cyp3a11Q64459 504 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Pan2Q8BGF7 1200 aaKnown RBP14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Wwp1Q8BZZ3 918 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 VcpkmtQ8C436 228 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 HlcsQ920N2 722 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cyp2c55Q9D816 490 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Psme3P61290 254 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Pfkfb2P70265 519 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 UcmaQ14BU0 138 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Scrn3Q3TMH2 418 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gxylt2Q810K9 444 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dcaf8Q8N7N5 591 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc35c2Q8VCX2 364 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cdhr5Q8VHF2 831 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 NwcQ9CQI4 244 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm6811E9Q3Y8 510 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rhbdl3P58873 404 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Lpcat1Q3TFD2 534 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zswim6Q80TB7 1207 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Arhgap28Q8BN58 729 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Taf5Q8C092 801 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Depdc1aQ8CIG0 804 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tmcc3Q8R310 477 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tfap2dQ91ZK0 452 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Far1Q922J9 515 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 ShprhQ7TPQ3 1674 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zbed5B2RPU8 756 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 A930018M24RikB7ZMY3 218 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm5799E9Q2M1 201 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zfp358E9Q8M1 571 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tmem169Q8BG50 297 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Anapc2Q8BZQ7 837 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc24a3Q99PD7 645 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Prg3Q9JL95 222 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Sult2a7A0A1B0GRF0 313 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zfp780bE9Q2S6 806 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hsd17b7O88736 334 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ncam1P13595 1115 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Fgfr1P16092 822 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hk1P17710 974 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PctpP53808 214 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 ErfP70459 551 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Klrb1fQ8VD98 217 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc13a3Q91Y63 600 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Sf3b1Q99NB9 1304 aaKnown RBP14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Akirin2B1AXD8 201 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Usp17lbE9Q9U0 468 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Vmn2r46L7N282 809 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 H2-EaP01904 255 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 P04224 255 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Prim2P33610 505 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Emilin3P59900 758 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Parp6Q6P6P7 630 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nemp1Q6ZQE4 437 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tas2r125Q7M710 311 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mapkap1Q8BKH7 522 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Trmt2aQ8BNV1 574 aaKnown RBP14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Teddm1bQ8CC62 306 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ifnl3Q8CGK6 193 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc44a4Q91VA1 707 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Pramel1Q99MW3 458 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PllpQ9DCU2 182 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Adam17Q9Z0F8 827 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ccnb1P24860 430 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Upf3aQ3ULJ3 422 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zdhhc17Q80TN5 632 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gabra5Q8BHJ7 463 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Pnma2Q8BHK0 365 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Pcdh20Q8BIZ0 952 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Samd4aQ8CBY1 711 aaKnown RBP14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 HnrnplQ8R081 586 aaKnown RBP14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Map3k21Q8VDG6 1002 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Kdelr1Q99JH8 212 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mid2Q9QUS6 705 aa14.19□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Banf1O54962 89 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Atxn2O70305 1285 aaKnown RBP14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 MipP51180 263 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mtf2Q02395 593 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zmym5Q3U2E2 627 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms