RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 NuggcD3YWJ0 796 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 TnfP06804 235 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Prim2P33610 505 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mpp1P70290 466 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Elf3Q3UPW2 391 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pcnx4Q3UVY5 1174 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 KizQ3UXL4 695 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Psg28Q4KL66 472 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fcrl5Q68SN8 596 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ptk7Q8BKG3 1062 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fzd10Q8BKG4 582 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Castor2Q8CAB8 329 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 CherpQ8CGZ0 936 aaKnown RBP9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim61Q8JZK6 461 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lin7aQ8JZS0 233 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tspan14Q8QZY6 270 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Acsf2Q8VCW8 615 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Adcy4Q91WF3 1077 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 PolkQ9QUG2 852 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Top3bQ9Z321 862 aaKnown RBP9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc194A0A140LIT1 234 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tmigd3G3X8R9 209 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Dync1i2O88487 612 aaKnown RBP9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Myl4P09541 193 aaKnown RBP9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Aldh3a1P47739 453 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Aqp4P55088 323 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 EsrrgP62509 458 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc85aQ5SP85 500 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cln3Q61124 438 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ecm1Q61508 559 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Kctd12Q6WVG3 327 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Polr2eQ80UW8 210 aaKnown RBP9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 TbcelQ8C5W3 424 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nlrp4bQ8C6J9 863 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ddx18Q8K363 660 aaKnown RBP9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pcdhb13Q91Y06 796 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Actrt2Q9D9L5 377 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Bmp15Q9Z0L4 392 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Kbtbd2G3X9X1 623 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Adcy6Q01341 1165 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Agap2Q3UHD9 1186 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 AcdQ5EE38 416 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 ScinQ60604 715 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm5414Q6IFZ8 552 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ubxn7Q6P5G6 467 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Alkbh8Q80Y20 664 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Entpd3Q8BFW6 529 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Guca1bQ8VBV8 201 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Clic3Q9D7P7 237 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tsga13Q9DA17 273 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Map3k6Q9WTR2 1291 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trpc7Q9WVC5 862 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ap4s1Q9WVL1 144 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm281D3Z1Y0 860 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp946F6VWU8 523 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trdmt1O55055 415 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Hsd17b7O88736 334 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 PdgfrbP05622 1098 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Q3KNL4 93 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nlrc4Q3UP24 1024 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Arl5cQ6P068 179 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Galnt10Q6P9S7 603 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lrfn2Q80TG9 788 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Stk32aQ8BGW6 398 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rd3Q8BRE0 195 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fnbp1lQ8K012 605 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gsto2Q8K2Q2 248 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cog4Q8R1U1 785 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mul1Q8VCM5 352 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tfap2dQ91ZK0 452 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 MydgfQ9CPT4 166 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rec114Q9CWH4 259 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 CacybpQ9CXW3 229 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cldn3Q9Z0G9 219 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fam81bA0A140LI28 432 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm17535J3KMR8 224 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm3264L7N2C5 238 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Vmn2r44L7N2E1 861 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 NumblO08919 604 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ptpn20O55082 426 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Stam2O88811 523 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cyp2a4P15392 494 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cyp2a5P20852 494 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tgm2P21981 686 aaKnown RBP9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ppp3ccP48455 513 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 PostnQ62009 838 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 XpaQ64267 272 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Kiaa1841Q68FF0 718 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nrg1Q6DR99 700 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Krt73Q6NXH9 539 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfr798Q7TRH8 311 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sec24bQ80ZX0 1251 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc44a2Q8BY89 706 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 SowahcQ8C0J6 512 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lin52Q8CD94 116 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfr30Q8VGD8 315 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Oas1dQ8VI95 361 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pcdhb10Q91VE5 797 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nuf2Q99P69 463 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ssxb1Q9CPU1 170 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms