RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PSD4Q8NDX1 1056 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 OMA1Q96E52 524 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 AGAP3Q96P47 875 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 IL1RL2Q9HB29 575 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CDH22Q9UJ99 828 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 MYRFQ9Y2G1 1151 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 F8W8V4 182 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 PMM2O15305 246 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 ITM2AO43736 263 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 AVILO75366 819 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 CAPN1P07384 714 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 MMP3P08254 477 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 P4HA1P13674 534 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 TAF5Q15542 800 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 KLHL38Q2WGJ6 581 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 CMPK2Q5EBM0 449 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 AAGABQ6PD74 315 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 NEK10Q6ZWH5 1172 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 NOP9Q86U38 636 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 LINC01465Q8N7H1 131 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 BBS2Q9BXC9 721 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 XPO7Q9UIA9 1087 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 H0YCG3 227 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 TLR3O15455 904 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 HBP1O60381 514 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 MAN1A2O60476 641 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 PRKCBP05771 671 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 TAF1CQ15572 869 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 ATG14Q6ZNE5 492 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 ZNF410Q86VK4 478 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 SERPINI1Q99574 410 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 HERPUD2Q9BSE4 406 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 UVRAGQ9P2Y5 699 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 NOCTQ9UK39 431 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 ANK1P16157 1881 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 MAGEC1O60732 1142 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 SERPINB7O75635 380 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 MT-CO1P00395 513 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 FUCA1P04066 466 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 EEF1DP3Q658K8 133 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 PDPK2PQ6A1A2 396 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 SUN2Q9UH99 717 aa12.12□□□□□ -0.47
RBFOX1-224ENST00000641259 STX16-NPEPL1H3BU86 382 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 CCRL2O00421 344 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 SIN3BO75182 1162 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 TFE3P19532 575 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 SLC26A2P50443 739 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 RAP1GDS1P52306 607 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM71AQ8IYT1 594 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM71DQ8N9W8 422 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 BPIFB6Q8NFQ5 453 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 COQ3Q9NZJ6 369 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 PCDHA3Q9Y5H8 950 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 SPO11Q9Y5K1 396 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 BTNL10A8MVZ5 291 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 H3BRB1 525 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 USP12O75317 370 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 TNNI1P19237 187 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 OSTNP61366 133 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 CAP1Q01518 475 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 MXD4Q14582 209 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 ZACNQ401N2 412 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 MTX3Q5HYI7 312 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 UGT2A3Q6UWM9 527 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 C17orf99Q6UX52 265 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 TMEM26Q6ZUK4 368 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 RFX6Q8HWS3 928 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 OFCC1Q8IZS5 231 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 SHC3Q92529 594 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 C12orf43Q96C57 262 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 UNKQ9C0B0 810 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 TOR3AQ9H497 397 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 PTPRHQ9HD43 1115 aa12.11□□□□□ -0.47
RBFOX1-224ENST00000641259 AP4E1Q9UPM8 1137 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms