RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RSPH9Q9H1X1 276 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 CAPN10Q9HC96 672 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 ANLNQ9NQW6 1124 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 SLCO3A1Q9UIG8 710 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 SNX10Q9Y5X0 201 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 NUMA1Q14980 2115 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 ADAMTS9Q9P2N4 1935 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 ITIH6Q6UXX5 1313 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 EDDM13A0A1B0GTR0 161 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 SMTNL1A8MU46 457 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 METTL12A8MUP2 240 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 I6L893 689 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 CLDN11O75508 207 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 ACSL1P33121 698 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 RDXP35241 583 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 PLK1P53350 603 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 SULT2A1Q06520 285 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 ARID5BQ14865 1188 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 EMC1Q8N766 993 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 OR52K2Q8NGK3 314 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 GANCQ8TET4 914 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 PPP1R9BQ96SB3 815 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 BTBD1Q9H0C5 482 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 TMPRSS4Q9NRS4 437 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 TMEM51Q9NW97 253 aa17.25■□□□□ 0.35
CACNA1A-259ENST00000638114 TARSL2A2RTX5 802 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 CNTN5O94779 1100 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 KCNK5O95279 499 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 ADRB1P08588 477 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 C7P10643 843 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 NSFP46459 744 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 CDH4P55283 916 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 ATP11AP98196 1134 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 CST6Q15828 149 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 C5orf22Q49AR2 442 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 C9orf64Q5T6V5 341 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 PSAPL1Q6NUJ1 521 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 LRSAM1Q6UWE0 723 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 LRRC31Q6UY01 552 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 ARCQ7LC44 396 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 FAM131BQ86XD5 332 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 ZCCHC9Q8N567 271 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 DNASE2BQ8WZ79 361 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 SNX19Q92543 992 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 PCDHB18PQ96TA0 734 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 PCED1AQ9H1Q7 454 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 PABPC3Q9H361 631 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 SLC25A13Q9UJS0 675 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 VPS28Q9UK41 221 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 NCKAP1Q9Y2A7 1128 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 PCDH15Q96QU1 1955 aa17.24■□□□□ 0.35
CACNA1A-259ENST00000638114 NYNRINQ9P2P1 1898 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 ASCC3Q8N3C0 2202 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 A0A1B0GTW7 788 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 ARHGAP33O14559 1287 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 TEX33O43247 280 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 SEMA4FO95754 770 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 RHOCP08134 193 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 SYPP08247 313 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 UNGP13051 313 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 ZNF165P49910 485 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 NOVA1P51513 510 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 CDO1Q16878 200 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 CLEC16AQ2KHT3 1053 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 ALFQ53S48 1182 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 MMAAQ8IVH4 418 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 MINDY1Q8N5J2 469 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 RXFP2Q8WXD0 754 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 ALG14Q96F25 216 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 FEM1AQ9BSK4 669 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 MUC3BQ9H195 1237 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 C6orf106Q9H6K1 298 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 SGK2Q9HBY8 427 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 FBXL12Q9NXK8 326 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 ADAM22Q9P0K1 906 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 EIF2B4Q9UI10 523 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 SCML1Q9UN30 329 aa17.23■□□□□ 0.35
CACNA1A-259ENST00000638114 E9PAM4 449 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 MID1O15344 667 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 GJB6O95452 261 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 VAV1P15498 845 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 SDC4P31431 198 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 PSMD8P48556 350 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 SFSWAPQ12872 951 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 PTP4A2Q12974 167 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 ACCSLQ4AC99 568 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 FILIP1LQ4L180 1135 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 ACBD5Q5T8D3 534 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 SH3PXD2AQ5TCZ1 1133 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 USP30Q70CQ3 517 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 BNIPLQ7Z465 357 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 TFAP2DQ7Z6R9 452 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 ZNF683Q8IZ20 524 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 STK40Q8N2I9 435 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 HDDC3Q8N4P3 179 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 OR2I1PQ8NGU4 316 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 JOSD2Q8TAC2 188 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 PTPRN2Q92932 1015 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 C1orf74Q96LT6 269 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms