RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PPATQ06203 517 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 GRB14Q14449 540 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 STYK1Q6J9G0 422 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 DCDC2Q9UHG0 476 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 VPS51Q9UID3 782 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TSPAN16Q9UKR8 245 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 LACTBL1A8MY62 500 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TRIM24O15164 1050 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 REXO1L1PQ8IX06 675 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TMEM79Q9BSE2 394 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 AGPAT3Q9NRZ7 376 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 CISHQ9NSE2 258 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 KLQ9UEF7 1012 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 CTSOP43234 321 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 ACVR2BQ13705 512 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 POTEAQ6S8J7 498 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 STX12Q86Y82 276 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 CFAP52Q8N1V2 620 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 PROX1Q92786 737 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 SNX12Q9UMY4 172 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 MYL12AP19105 171 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 GSTM5P46439 218 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 FBXO30Q8TB52 745 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 GAD1Q99259 594 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 NDNQ99608 321 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 MYL12BO14950 172 aa18.14■□□□□ 0.5
CACNA1A-227ENST00000636549 HSD3B2P26439 372 aa18.14■□□□□ 0.5
CACNA1A-227ENST00000636549 CHERPQ8IWX8 916 aaKnown RBP18.14■□□□□ 0.5
CACNA1A-227ENST00000636549 FBXO39Q8N4B4 442 aa18.14■□□□□ 0.5
CACNA1A-227ENST00000636549 FANCEQ9HB96 536 aa18.14■□□□□ 0.5
CACNA1A-227ENST00000636549 JCADQ9P266 1359 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 LOC100506127A0A0U1RQW1 187 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 KCNK1O00180 336 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 MATN4O95460 622 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 VDRP11473 427 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ELNP15502 786 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 AMZ1Q400G9 498 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 USP45Q70EL2 814 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 TMPRSS9Q7Z410 1059 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 FIBCD1Q8N539 461 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 LMLNQ96KR4 655 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 GAL3ST1Q99999 423 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 SPATC1LQ9H0A9 340 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ASAH2Q9NR71 780 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 MCUBQ9NWR8 336 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 A0A0A6YYK5 440 aaPredicted RBP18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 OGTO15294 1046 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ALG11Q2TAA5 492 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ESRP1Q6NXG1 681 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 COMMD8Q9NX08 183 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 NTSP30990 170 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 HPCAL1P37235 193 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 CD86P42081 329 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 CNTN2Q02246 1040 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 OASLQ15646 514 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ARMC12Q5T9G4 340 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 RNF145Q96MT1 663 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 CCDC167Q9P0B6 97 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 CDH9Q9ULB4 789 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ZMYND8Q9ULU4 1186 aaPredicted RBP18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 SATB2Q9UPW6 733 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 GAKO14976 1311 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 AGTP01019 485 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 GALK1P51570 392 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ADGRG6Q86SQ4 1221 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 GHDCQ8N2G8 530 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 MPP4Q96JB8 637 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 TEKT5Q96M29 485 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 KIAA1257Q9ULG3 409 aa18.14■□□□□ 0.49
CACNA1A-227ENST00000636549 ENTPD3O75355 529 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 VAPBO95292 243 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 CFIP05156 583 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ATP5F1P24539 256 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 HERVK_113P62684 666 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 FAM98AQ8NCA5 519 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 DGCR6LQ9BY27 220 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 NAB2Q15742 525 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 FAM220AQ7Z4H9 259 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF483Q8TF39 744 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 GRAMD1AQ96CP6 724 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 PPP1R16AQ96I34 528 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ZBTB45Q96K62 511 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 MAGEA9P43362 315 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 DSG1Q02413 1049 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 C19orf60Q96EN9 201 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ARHGAP9Q9BRR9 750 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ADAM30Q9UKF2 790 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 LIN7AO14910 233 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ATP8B1O43520 1251 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF470Q6ECI4 717 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 NPNTQ6UXI9 565 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 PRMT3O60678 531 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 TSPAN9O75954 239 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 LRP8Q14114 963 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 DGCR6Q14129 220 aa18.13■□□□□ 0.49
CACNA1A-227ENST00000636549 KIAA0391O15091 583 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms