RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 K7ESM1 405 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 SCAMP1O15126 338 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 IRAK2O43187 625 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 SLC7A4O43246 635 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 RNGTTO60942 597 aaKnown RBP18.79■□□□□ 0.6
CLN6-212ENST00000636020 ZBED1O96006 694 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 SLC6A4P31645 630 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 C4orf17Q53FE4 359 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 SETMARQ53H47 684 aaPredicted RBP18.79■□□□□ 0.6
CLN6-212ENST00000636020 FAM133BQ5BKY9 247 aaKnown RBP18.79■□□□□ 0.6
CLN6-212ENST00000636020 FOXR1Q6PIV2 292 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 SV2AQ7L0J3 742 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 WDR36Q8NI36 951 aaKnown RBP18.79■□□□□ 0.6
CLN6-212ENST00000636020 ULBP1Q9BZM6 244 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 TNMDQ9H2S6 317 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 KBTBD4Q9NVX7 518 aa18.79■□□□□ 0.6
CLN6-212ENST00000636020 TFIP11Q9UBB9 837 aaKnown RBP18.79■□□□□ 0.6
CLN6-212ENST00000636020 NEMP2A6NFY4 417 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 MSI1O43347 362 aaKnown RBP18.78■□□□□ 0.6
CLN6-212ENST00000636020 HLA-DRAP01903 254 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 TKTL1P51854 596 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 ELAVL3Q14576 367 aaKnown RBP18.78■□□□□ 0.6
CLN6-212ENST00000636020 PITRM1Q5JRX3 1037 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 ERICH6BQ5W0A0 696 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 RBM44Q6ZP01 1051 aaKnown RBP18.78■□□□□ 0.6
CLN6-212ENST00000636020 MMS22LQ6ZRQ5 1243 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 PDILTQ8N807 584 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 RNF139Q8WU17 664 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 ARRDC3Q96B67 414 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 DUSP23Q9BVJ7 150 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 LRRC27Q9C0I9 530 aa18.78■□□□□ 0.6
CLN6-212ENST00000636020 APOBEC3GQ9HC16 384 aaKnown RBP18.78■□□□□ 0.6
CLN6-212ENST00000636020 RP1P56715 2156 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 NOBOXO60393 691 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 ITGA2BP08514 1039 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 CD58P19256 250 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 ECT2LQ008S8 904 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 FSCBQ5H9T9 825 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 BSPRYQ5W0U4 402 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 TPCN2Q8NHX9 752 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 EDEM1Q92611 657 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 HEXIM2Q96MH2 286 aaKnown RBP18.77■□□□□ 0.6
CLN6-212ENST00000636020 PSMG3-AS1Q96PY0 264 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 MAN2B2Q9Y2E5 1009 aa18.77■□□□□ 0.6
CLN6-212ENST00000636020 NYNRINQ9P2P1 1898 aaKnown RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 CPED1A4D0V7 1026 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 NEBLO76041 1014 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 IGLV3-27P01718 113 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 PIK3CAP42336 1068 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 SLC11A2P49281 568 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 RPS24P62847 133 aaKnown RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 SRSF6Q13247 344 aaKnown RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 ZNF177Q13360 481 aaPredicted RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 CDKN3Q16667 212 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 ZNF394Q53GI3 561 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 AGBL4Q5VU57 503 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 CNNM4Q6P4Q7 775 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 GUSBP11Q6P575 273 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 HJURPQ8NCD3 748 aaPredicted RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 OR13H1Q8NG92 308 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 MYEOVQ96EZ4 313 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 IFT43Q96FT9 208 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 RPL10LQ96L21 214 aaKnown RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 PRICKLE1Q96MT3 831 aaPredicted RBP18.76■□□□□ 0.59
CLN6-212ENST00000636020 MYOCQ99972 504 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 DNAI2Q9GZS0 605 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 DMAC2Q9NW81 257 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 WDR70Q9NW82 654 aa18.76■□□□□ 0.59
CLN6-212ENST00000636020 SLC31A1O15431 190 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 ACSL4O60488 711 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 PPFIA2O75334 1257 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 TCEA3O75764 348 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 VAV1P15498 845 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 TGIF1Q15583 401 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 TBR1Q16650 682 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 KNOP1Q1ED39 458 aaKnown RBP18.75■□□□□ 0.59
CLN6-212ENST00000636020 NADSYN1Q6IA69 706 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 ZCCHC8Q6NZY4 707 aaKnown RBP18.75■□□□□ 0.59
CLN6-212ENST00000636020 EFL1Q7Z2Z2 1120 aaKnown RBP18.75■□□□□ 0.59
CLN6-212ENST00000636020 UNC45BQ8IWX7 931 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 CARNMT1Q8N4J0 409 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 TMC2Q8TDI7 906 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 TMX3Q96JJ7 454 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 SPAG5Q96R06 1193 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 CALN1Q9BXU9 219 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 BACH2Q9BYV9 841 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 SLC25A18Q9H1K4 315 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 SARDHQ9UL12 918 aa18.75■□□□□ 0.59
CLN6-212ENST00000636020 CCDC187A0A096LP49 1063 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 EME2A4GXA9 379 aaPredicted RBP18.74■□□□□ 0.59
CLN6-212ENST00000636020 TULP2O00295 520 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 IKBKBO14920 756 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 MOCS3O95396 460 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 PRLRP16471 622 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 SLC5A2P31639 672 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 CNTN1Q12860 1018 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 CDH18Q13634 790 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 ZNF542PQ5EBM4 170 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms