RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 HMGB4Q8WW32 186 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 GAB3Q8WWW8 586 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 CTNNBL1Q8WYA6 563 aaPredicted RBP14.05□□□□□ -0.16
PFDN5-220ENST00000628881 TBC1D31Q96DN5 1066 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 ALG14Q96F25 216 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 MYO19Q96H55 970 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 MRGPRX3Q96LB0 322 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 FEM1AQ9BSK4 669 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 PACSIN1Q9BY11 444 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 MAGEB5Q9BZ81 275 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 TPSD1Q9BZJ3 242 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 SPTLC3Q9NUV7 552 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
PFDN5-220ENST00000628881 UVRAGQ9P2Y5 699 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 ZNF212Q9UDV6 495 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 ANAPC7Q9UJX3 599 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 ERVW-1Q9UQF0 538 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 OR51B4Q9Y5P0 310 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 EML5Q05BV3 1969 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 CKAP5Q14008 2032 aa14.05□□□□□ -0.16
PFDN5-220ENST00000628881 PRPSAP2O60256 369 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 RPP40O75818 363 aaKnown RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 EPHX1P07099 455 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 HLA-EP13747 358 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 RHOQP17081 205 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 GABRG2P18507 467 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 MIPP30301 263 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 CDC25BP30305 580 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 OR1E1P30953 314 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PCK1P35558 622 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 CTSOP43234 321 aaPredicted RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 ST8SIA6P61647 398 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 ECT2LQ008S8 904 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 SRSF5Q13243 272 aaKnown RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PIGHQ14442 188 aaPredicted RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 RNF219Q5W0B1 726 aaPredicted RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 RWDD4Q6NW29 188 aaKnown RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 ZNF783Q6ZMS7 281 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 NLRP14Q86W24 1093 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PYROXD2Q8N2H3 581 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PGBD3Q8N328 593 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 NIPA2Q8N8Q9 360 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 ZNF564Q8TBZ8 553 aaPredicted RBP14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PANX2Q96RD6 677 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PEBP4Q96S96 227 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 EPAS1Q99814 870 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 MUC3BQ9H195 1237 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 PCSK1NQ9UHG2 260 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 IP6K2Q9UHH9 426 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 AP4E1Q9UPM8 1137 aa14.04□□□□□ -0.16
PFDN5-220ENST00000628881 USP34Q70CQ2 3546 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 ILVBLA1L0T0 632 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 PRR23AA6NEV1 266 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 EIF3CLB5ME19 914 aaKnown RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 MYO1FO00160 1098 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 NDUFV2P19404 249 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 HTR7P34969 479 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 MAPKAPK2P49137 400 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SEMA3BQ13214 749 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 CAMK2GQ13555 558 aaPredicted RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SIM2Q14190 667 aaPredicted RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 USP39Q53GS9 565 aaKnown RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 CYP4V2Q6ZWL3 525 aaPredicted RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 CEP68Q76N32 757 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 PSTKQ8IV42 348 aaKnown RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 ZNF366Q8N895 744 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SUMF1Q8NBK3 374 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 ERLEC1Q96DZ1 483 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 BTBD6Q96KE9 485 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 MRGPRX1Q96LB2 322 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 EIF3CQ99613 913 aaKnown RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SNRNP25Q9BV90 132 aaKnown RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 FBRSQ9HAH7 460 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 TMEM248Q9NWD8 314 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 GPATCH2LQ9NWQ4 482 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 CTTNBP2NLQ9P2B4 639 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SUN2Q9UH99 717 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 USP18Q9UMW8 372 aa14.03□□□□□ -0.16
PFDN5-220ENST00000628881 SMG5Q9UPR3 1016 aaKnown RBP14.03□□□□□ -0.16
PFDN5-220ENST00000628881 CREB3O43889 395 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 FECHP22830 423 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 EPHB2P29323 1055 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 NNMTP40261 264 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 NUMBP49757 651 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 STK19P49842 368 aaPredicted RBP14.02□□□□□ -0.17
PFDN5-220ENST00000628881 COPAP53621 1224 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 KRT83P78385 493 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 BYSLQ13895 437 aaKnown RBP14.02□□□□□ -0.17
PFDN5-220ENST00000628881 HNRNPA1L2Q32P51 320 aaKnown RBP14.02□□□□□ -0.17
PFDN5-220ENST00000628881 PRR23BQ6ZRT6 265 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 ASCL5Q7RTU5 278 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 C11orf74Q86VG3 221 aa14.02□□□□□ -0.17
PFDN5-220ENST00000628881 CCDC170Q8IYT3 715 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms