RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PSME3P61289 254 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CDK16Q00536 496 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TSGA10IPQ3SY00 556 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF394Q53GI3 561 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 FIGNQ5HY92 759 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PLEKHH3Q7Z736 793 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SLC44A2Q8IWA5 706 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TPCN2Q8NHX9 752 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 NSUN6Q8TEA1 469 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 APOPT1Q96IL0 206 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 GRIP2Q9C0E4 1043 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZC3H11AO75152 810 aaKnown RBP eCLIP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 LYNP07948 512 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CHRM3P20309 590 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ALDH1A3P47895 512 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 GRM4Q14833 912 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZBTB6Q15916 424 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 RNF43Q68DV7 783 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SULT1C3Q6IMI6 304 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 LEMD2Q8NC56 503 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 RPRD1AQ96P16 312 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SEPT5Q99719 369 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 MIEF1Q9NQG6 463 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 VPS51Q9UID3 782 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ST3GAL5Q9UNP4 418 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ERN1O75460 977 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CCNKO75909 580 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ACADVLP49748 655 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CDC16Q13042 620 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM132BQ14DG7 1078 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SUZ12Q15022 739 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 EPHA7Q15375 998 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 EIF5AL1Q6IS14 154 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PGBD2Q6P3X8 592 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 FAR1Q8WVX9 515 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PGM2Q96G03 612 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 AP1S3Q96PC3 154 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 MCCC1Q96RQ3 725 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 LRMDAQ9H2I8 198 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 LNPEPQ9UIQ6 1025 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CRLS1Q9UJA2 301 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SNX7Q9UNH6 387 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TEX33O43247 280 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CYP2C9P11712 490 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PTPN1P18031 435 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PCSK1P29120 753 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PNPLA4P41247 253 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PDK3Q15120 406 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 AGKQ53H12 422 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 C1orf189Q5VU69 101 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PI16Q6UXB8 463 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 GPC2Q8N158 579 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 QRFPRQ96P65 431 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MND1Q9BWT6 205 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TTYH1Q9H313 450 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CHKBQ9Y259 395 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 COQ6Q9Y2Z9 468 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 C19orf81C9J6K1 198 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TRDMT1O14717 391 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PGRMC2O15173 223 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CHST10O43529 356 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 F9P00740 461 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PCNAP12004 261 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ETS1P14921 441 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 COMTP21964 271 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MZF1P28698 734 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TNFRSF8P28908 595 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SLC1A6P48664 564 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 NEK3P51956 506 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 STK32CQ86UX6 486 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 AGBL3Q8NEM8 1001 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CASKIN2Q8WXE0 1202 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 KCNB2Q92953 911 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TMCO6Q96DC7 493 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MCEEQ96PE7 176 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 POLR3FQ9H1D9 316 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 FAM217BQ9NTX9 383 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SLC12A4Q9UP95 1085 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PIN4Q9Y237 131 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ALG6Q9Y672 507 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 A0A1W2PQ72 361 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 IFNA7P01567 189 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ALDH7A1P49419 539 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CCINQ13939 588 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 FASTKQ14296 549 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 UBE2SQ16763 222 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ANKRD26P1Q6NSI1 321 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CHSY1Q86X52 802 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PLCZ1Q86YW0 608 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 OSBP2Q969R2 916 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ELOVL6Q9H5J4 265 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MED11Q9P086 117 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PADI4Q9UM07 663 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 RPS6KL1Q9Y6S9 549 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 INPP4BO15327 924 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TSHRP16473 764 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms