RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 FGF10O15520 208 aaPredicted RBP16.04■□□□□ 0.16
RPP40-207ENST00000618533 MTA2O94776 668 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 CNTN5O94779 1100 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 IPO7O95373 1038 aaKnown RBP16.04■□□□□ 0.16
RPP40-207ENST00000618533 RHOCP08134 193 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 MIPP30301 263 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 OR1E1P30953 314 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 NNMTP40261 264 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 IL12RB1P42701 662 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 IRAK1P51617 712 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 SEMA3BQ13214 749 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 TCEAL1Q15170 157 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 SPA17Q15506 151 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 PTPRNQ16849 979 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 FNDC3BQ53EP0 1204 aaKnown RBP16.04■□□□□ 0.16
RPP40-207ENST00000618533 BOLA3Q53S33 107 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 ARTNQ5T4W7 220 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
RPP40-207ENST00000618533 ARFGAP1Q8N6T3 406 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 ACOX2Q99424 681 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 FEM1AQ9BSK4 669 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 C2orf49Q9BVC5 232 aaPredicted RBP16.04■□□□□ 0.16
RPP40-207ENST00000618533 TMEM245Q9H330 911 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 CATSPERBQ9H7T0 1116 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 TMEM248Q9NWD8 314 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 MPP6Q9NZW5 540 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 ZNF212Q9UDV6 495 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 SUN2Q9UH99 717 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 USP18Q9UMW8 372 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 AP4E1Q9UPM8 1137 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
RPP40-207ENST00000618533 A0A1W2PQF6 199 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 SYNCRIPO60506 623 aaKnown RBP16.03■□□□□ 0.16
RPP40-207ENST00000618533 MAN1A1P33908 653 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 ARHGAP25P42331 645 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 FNTBP49356 437 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 KRT83P78385 493 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 BYSLQ13895 437 aaKnown RBP16.03■□□□□ 0.16
RPP40-207ENST00000618533 RWDD4Q6NW29 188 aaKnown RBP16.03■□□□□ 0.16
RPP40-207ENST00000618533 C11orf74Q86VG3 221 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 NLRP14Q86W24 1093 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 DCAF4L2Q8NA75 395 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 TEKT4Q8WW24 435 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 SORCS1Q8WY21 1168 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 ALG14Q96F25 216 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 SNRNP25Q9BV90 132 aaKnown RBP16.03■□□□□ 0.16
RPP40-207ENST00000618533 PACSIN1Q9BY11 444 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 MUC3BQ9H195 1237 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 CD248Q9HCU0 757 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 ZDHHC4Q9NPG8 344 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 SLC25A13Q9UJS0 675 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 VPS28Q9UK41 221 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 ERVW-1Q9UQF0 538 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 OR51B4Q9Y5P0 310 aa16.03■□□□□ 0.16
RPP40-207ENST00000618533 SPAG17Q6Q759 2223 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 NYNRINQ9P2P1 1898 aaKnown RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 TCRBV21S2A2A0A5A6 115 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 WASH4PA8MWX3 477 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 FAM72CH0Y354 149 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 PROSCO94903 275 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 C7P10643 843 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 MZF1P28698 734 aaPredicted RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 EPHB2P29323 1055 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 WASP42768 502 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 GSDMDP57764 484 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 TPI1P60174 286 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 CAMK2GQ13555 558 aaPredicted RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 HADHQ16836 314 aaKnown RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 FAM72AQ5TYM5 149 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 HEATR6Q6AI08 1181 aaKnown RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 ANO7Q6IWH7 933 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 FAM72DQ6L9T8 149 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 TFAP2DQ7Z6R9 452 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 FAM72BQ86X60 149 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 APCDD1Q8J025 514 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 RTL3Q8N8U3 475 aaKnown RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 MDGA1Q8NFP4 955 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 CYB5D2Q8WUJ1 264 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 GAB3Q8WWW8 586 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 CALR3Q96L12 384 aaKnown RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 BCCIPQ9P287 314 aaKnown RBP eCLIP16.02■□□□□ 0.16
RPP40-207ENST00000618533 PCSK1NQ9UHG2 260 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 NEU3Q9UQ49 428 aa16.02■□□□□ 0.16
RPP40-207ENST00000618533 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.16
RPP40-207ENST00000618533 TARSL2A2RTX5 802 aaKnown RBP16.01■□□□□ 0.15
RPP40-207ENST00000618533 WASH3PC4AMC7 463 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 CREB3O43889 395 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 NDUFA10O95299 355 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 EPHX1P07099 455 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 PRKCHP24723 683 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 MAGEA1P43355 309 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 HCAR3P49019 387 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 HADHBP55084 474 aaKnown RBP16.01■□□□□ 0.15
RPP40-207ENST00000618533 GNA12Q03113 381 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 DPYSL2Q16555 572 aa16.01■□□□□ 0.15
RPP40-207ENST00000618533 HNRNPA1L2Q32P51 320 aaKnown RBP16.01■□□□□ 0.15
RPP40-207ENST00000618533 USP39Q53GS9 565 aaKnown RBP16.01■□□□□ 0.15
RPP40-207ENST00000618533 CYP4V2Q6ZWL3 525 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms