RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PHF20Q9BVI0 1012 aa6.11□□□□□ -1.43
RFX3-212ENST00000617270 TMBIM4Q9HC24 238 aa6.11□□□□□ -1.43
RFX3-212ENST00000617270 ARL15Q9NXU5 204 aa6.11□□□□□ -1.43
RFX3-212ENST00000617270 IKZF3Q9UKT9 509 aa6.11□□□□□ -1.43
RFX3-212ENST00000617270 ABCC2Q92887 1545 aa6.11□□□□□ -1.43
RFX3-212ENST00000617270 RBAK-RBAKDNI3L0D1 243 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 OGTO15294 1046 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 DCXO43602 365 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SCN2BO60939 215 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 PRKAR1AP10644 381 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 MYL9P24844 172 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 NEK3P51956 506 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 PCNX4Q63HM2 1172 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 GPRC5AQ8NFJ5 357 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 FAR1Q8WVX9 515 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 FRMD8P1Q9BZ68 369 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 ATXN3LQ9H3M9 355 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ATP13A1Q9HD20 1204 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 TLR8Q9NR97 1041 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 SMPD4Q9NXE4 827 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 STARD13Q9Y3M8 1113 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 IRAK3Q9Y616 596 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 PEG3Q9GZU2 1588 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ZW10O43264 779 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CSDE1O75534 798 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 CYP4B1P13584 511 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 BCAT1P54687 386 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 RFX4Q33E94 735 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 DEF8Q6ZN54 512 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 RBM43Q6ZSC3 357 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 GLT6D1Q7Z4J2 308 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ADGRG2Q8IZP9 1017 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 KBTBD8Q8NFY9 601 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 MYDGFQ969H8 173 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ZHX1-C8orf76Q96EF9 292 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CGRRF1Q99675 332 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 DMGDHQ9UI17 866 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 FBXL21Q9UKT6 434 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SMCO3A2RU48 225 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 H7C1W4 665 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 TP73O15350 636 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SERPINF2P08697 491 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CYP11B1P15538 503 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 PGAM1P18669 254 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ME2P23368 584 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CBX5P45973 191 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 MCCD1P59942 119 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 SKP1P63208 163 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CDH17Q12864 832 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 IL18R1Q13478 541 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 EML3Q32P44 896 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SAMD4BQ5PRF9 694 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 TMEM63BQ5T3F8 832 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 ULK2Q8IYT8 1036 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ZNF540Q8NDQ6 660 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ATL1Q8WXF7 558 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 COX4I2Q96KJ9 171 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 PLEKHF1Q96S99 279 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ABCG8Q9H221 673 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 NMRAL1Q9HBL8 299 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 FBXO21O94952 628 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 OR56A5P0C7T3 313 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 TKTL1P51854 596 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 DLG1Q12959 904 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 MSLNQ13421 630 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 EZH2Q15910 746 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 FOXR1Q6PIV2 292 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 TMPRSS6Q8IU80 811 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SIRT2Q8IXJ6 389 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 FAM98AQ8NCA5 519 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 RAD51AP1Q96B01 352 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SLC38A2Q96QD8 506 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ZNF184Q99676 751 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 JMJD4Q9H9V9 463 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CLN6Q9NWW5 311 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 MTMR4Q9NYA4 1195 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 NKIRAS2Q9NYR9 191 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 AKAP7Q9P0M2 348 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 MORF4L1Q9UBU8 362 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 FLT1P17948 1338 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 OR7A10O76100 309 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 LCA5LO95447 670 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 ZNF7P17097 686 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 RPL9P32969 192 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 TKFCQ3LXA3 575 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 MARC1Q5VT66 337 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 NEK5Q6P3R8 708 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 TMED8Q6PL24 325 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 RNF180Q86T96 592 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 TRAPPC5Q8IUR0 188 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 PCDH20Q8N6Y1 951 aaKnown RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
RFX3-212ENST00000617270 GRIN3AQ8TCU5 1115 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 APOPT1Q96IL0 206 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 GLT1D1Q96MS3 346 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 SLC25A23Q9BV35 468 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 CDHR2Q9BYE9 1310 aa6.1□□□□□ -1.43
RFX3-212ENST00000617270 RBM22Q9NW64 420 aaKnown RBP eCLIP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms